Analysis of interatomic Contacts of Structural Units in PDB entry:
3UIU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UIU entry

There are 2 chains in PDB entry 3UIU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 254LYS 541
B
 GLU 254LYS 541
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 3UIU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
260 266Right-handed alpha
Helix 2
2
A
304 315Right-handed alpha
Helix 3
3
A
373 380Right-handed alpha
Helix 4
4
A
390 408Right-handed alpha
Helix 5
5
A
469 483Right-handed alpha
Helix 6
6
A
489 501Right-handed alpha
Helix 7
7
A
508 519Right-handed alpha
Helix 8
8
A
522 526Right-handed 310
Helix 9
9
A
528 539Right-handed alpha
Helix 10
10
B
260 266Right-handed alpha
Helix 11
11
B
304 315Right-handed alpha
Helix 12
12
B
373 380Right-handed alpha
Helix 13
13
B
390 408Right-handed alpha
Helix 14
14
B
469 483Right-handed alpha
Helix 15
15
B
489 501Right-handed alpha
Helix 16
16
B
508 519Right-handed alpha
Helix 17
17
B
522 526Right-handed 310
Helix 18
18
B
528 539Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 3UIU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 272first strand
Strand 2
A
279 286anti-parallel
Strand 3
A
292 299anti-parallel
Strand 4
A
361 366anti-parallel
Strand 5
A
323 329anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
410 412first strand
Strand 2
A
436 438anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
420 422first strand
Strand 2
A
428 430anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
267 272first strand
Strand 2
B
279 286anti-parallel
Strand 3
B
292 299anti-parallel
Strand 4
B
361 366anti-parallel
Strand 5
B
323 329anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
410 412first strand
Strand 2
B
436 438anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
420 422first strand
Strand 2
B
428 430anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il