Analysis of interatomic Contacts of Structural Units in PDB entry:
3UK7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UK7 entry

There are 9 chains in PDB entry 3UK7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3ILE 119
A
 HIS 121ILE 312
A
 HIS 314PHE 388
B
 ASN 3ILE 119
B
 HIS 121ILE 312
B
 HIS 314PHE 388
C
 GLY -7ILE 119
C
 HIS 121ILE 312
C
 HIS 314PHE 388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 3UK7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 30Right-handed alpha
Helix 2
2
A
73 77Right-handed 310
Helix 3
3
A
78 82Right-handed 310
Helix 4
4
A
91 97Right-handed alpha
Helix 5
5
A
99 112Right-handed alpha
Helix 6
6
A
122 129Right-handed alpha
Helix 7
7
A
140 142Right-handed 310
Helix 8
8
A
143 150Right-handed alpha
Helix 9
9
A
174 176Right-handed 310
Helix 10
10
A
177 189Right-handed alpha
Helix 11
11
A
210 224Right-handed alpha
Helix 12
12
A
266 270Right-handed 310
Helix 13
13
A
271 275Right-handed 310
Helix 14
14
A
284 290Right-handed alpha
Helix 15
15
A
292 305Right-handed alpha
Helix 16
16
A
315 322Right-handed alpha
Helix 17
17
A
333 335Right-handed 310
Helix 18
18
A
336 343Right-handed alpha
Helix 19
19
A
367 369Right-handed 310
Helix 20
20
A
370 383Right-handed alpha
Helix 21
21
B
17 30Right-handed alpha
Helix 22
22
B
73 77Right-handed 310
Helix 23
23
B
78 82Right-handed 310
Helix 24
24
B
91 97Right-handed alpha
Helix 25
25
B
99 112Right-handed alpha
Helix 26
26
B
122 130Right-handed alpha
Helix 27
27
B
140 142Right-handed 310
Helix 28
28
B
143 150Right-handed alpha
Helix 29
29
B
174 176Right-handed 310
Helix 30
30
B
177 189Right-handed alpha
Helix 31
31
B
210 224Right-handed alpha
Helix 32
32
B
271 275Right-handed 310
Helix 33
33
B
284 290Right-handed alpha
Helix 34
34
B
292 305Right-handed alpha
Helix 35
35
B
315 322Right-handed alpha
Helix 36
36
B
333 335Right-handed 310
Helix 37
37
B
336 343Right-handed alpha
Helix 38
38
B
367 369Right-handed 310
Helix 39
39
B
370 383Right-handed alpha
Helix 40
40
C
-3 1Right-handed 310
Helix 41
41
C
17 30Right-handed alpha
Helix 42
42
C
73 77Right-handed 310
Helix 43
43
C
78 82Right-handed 310
Helix 44
44
C
92 97Right-handed alpha
Helix 45
45
C
99 113Right-handed alpha
Helix 46
46
C
122 129Right-handed alpha
Helix 47
47
C
140 142Right-handed 310
Helix 48
48
C
143 150Right-handed alpha
Helix 49
49
C
174 176Right-handed 310
Helix 50
50
C
177 189Right-handed alpha
Helix 51
51
C
210 223Right-handed alpha
Helix 52
52
C
271 275Right-handed 310
Helix 53
53
C
284 290Right-handed alpha
Helix 54
54
C
292 305Right-handed alpha
Helix 55
55
C
315 322Right-handed alpha
Helix 56
56
C
333 335Right-handed 310
Helix 57
57
C
336 343Right-handed alpha
Helix 58
58
C
367 369Right-handed 310
Helix 59
59
C
370 383Right-handed alpha
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There are 27 sheets in PDB entry 3UK7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
6 10parallel
Strand 3
A
84 87parallel
Strand 4
A
116 119parallel
Strand 5
A
169 172parallel
Strand 6
A
163 166anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 16first strand
Strand 2
A
49 53parallel
Strand 3
A
61 64anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
68 69anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 137first strand
Strand 2
A
153 154parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 194first strand
Strand 2
A
385 387anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 230first strand
Strand 2
A
199 203parallel
Strand 3
A
277 280parallel
Strand 4
A
309 312parallel
Strand 5
A
362 365parallel
Strand 6
A
356 359anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 209first strand
Strand 2
A
242 246parallel
Strand 3
A
254 257anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 240first strand
Strand 2
A
261 262anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 330first strand
Strand 2
A
346 347parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 37first strand
Strand 2
B
6 10parallel
Strand 3
B
84 87parallel
Strand 4
B
116 119parallel
Strand 5
B
169 172parallel
Strand 6
B
163 166anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 16first strand
Strand 2
B
49 53parallel
Strand 3
B
61 64anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 47first strand
Strand 2
B
68 69anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 137first strand
Strand 2
B
153 154parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
192 194first strand
Strand 2
B
385 387anti-parallel
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There are 6 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
226 230first strand
Strand 2
B
199 203parallel
Strand 3
B
277 280parallel
Strand 4
B
309 312parallel
Strand 5
B
362 365parallel
Strand 6
B
357 359anti-parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
208 209first strand
Strand 2
B
242 246parallel
Strand 3
B
254 257anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 240first strand
Strand 2
B
261 262anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
329 330first strand
Strand 2
B
346 347parallel
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There are 6 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 37first strand
Strand 2
C
6 10parallel
Strand 3
C
84 87parallel
Strand 4
C
116 119parallel
Strand 5
C
169 172parallel
Strand 6
C
163 166anti-parallel
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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
15 16first strand
Strand 2
C
49 53parallel
Strand 3
C
61 64anti-parallel
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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 47first strand
Strand 2
C
68 69anti-parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
136 137first strand
Strand 2
C
153 154parallel
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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
192 194first strand
Strand 2
C
385 387anti-parallel
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There are 6 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
226 230first strand
Strand 2
C
199 203parallel
Strand 3
C
277 280parallel
Strand 4
C
309 312parallel
Strand 5
C
362 365parallel
Strand 6
C
357 359anti-parallel
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There are 3 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
208 209first strand
Strand 2
C
242 246parallel
Strand 3
C
254 257anti-parallel
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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
239 240first strand
Strand 2
C
261 262anti-parallel
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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
329 330first strand
Strand 2
C
346 347parallel
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