Analysis of interatomic Contacts of Structural Units in PDB entry:
3UMV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UMV entry

There are 2 chains in PDB entry 3UMV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 19ASN 490
B
 SER 19SER 486
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 3UMV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 24Right-handed 310
Helix 2
2
A
53 66Right-handed alpha
Helix 3
3
A
81 85Right-handed 310
Helix 4
4
A
86 107Right-handed alpha
Helix 5
5
A
119 128Right-handed alpha
Helix 6
6
A
140 158Right-handed alpha
Helix 7
7
A
173 178Right-handed alpha
Helix 8
8
A
184 194Right-handed alpha
Helix 9
9
A
195 200Right-handed alpha
Helix 10
10
A
221 232Right-handed alpha
Helix 11
11
A
245 255Right-handed alpha
Helix 12
12
A
259 264Right-handed alpha
Helix 13
13
A
267 272Right-handed alpha
Helix 14
14
A
277 281Right-handed 310
Helix 15
15
A
284 290Right-handed alpha
Helix 16
16
A
294 306Right-handed alpha
Helix 17
17
A
309 321Right-handed alpha
Helix 18
18
A
321 334Right-handed alpha
Helix 19
19
A
339 343Right-handed 310
Helix 20
20
A
344 354Right-handed alpha
Helix 21
21
A
364 370Right-handed alpha
Helix 22
22
A
375 389Right-handed alpha
Helix 23
23
A
392 406Right-handed alpha
Helix 24
24
A
409 425Right-handed alpha
Helix 25
25
A
430 443Right-handed alpha
Helix 26
26
A
462 470Right-handed alpha
Helix 27
27
A
471 490Right-handed alpha
Helix 28
28
B
22 24Right-handed 310
Helix 29
29
B
53 66Right-handed alpha
Helix 30
30
B
81 85Right-handed 310
Helix 31
31
B
86 107Right-handed alpha
Helix 32
32
B
117 119Right-handed 310
Helix 33
33
B
120 129Right-handed alpha
Helix 34
34
B
140 158Right-handed alpha
Helix 35
35
B
173 178Right-handed alpha
Helix 36
36
B
184 193Right-handed alpha
Helix 37
37
B
195 200Right-handed alpha
Helix 38
38
B
221 233Right-handed alpha
Helix 39
39
B
245 255Right-handed alpha
Helix 40
40
B
259 264Right-handed alpha
Helix 41
41
B
267 272Right-handed alpha
Helix 42
42
B
277 281Right-handed 310
Helix 43
43
B
284 291Right-handed alpha
Helix 44
44
B
294 305Right-handed alpha
Helix 45
45
B
306 308Right-handed 310
Helix 46
46
B
309 321Right-handed alpha
Helix 47
47
B
321 334Right-handed alpha
Helix 48
48
B
339 343Right-handed 310
Helix 49
49
B
344 354Right-handed alpha
Helix 50
50
B
364 370Right-handed alpha
Helix 51
51
B
375 389Right-handed alpha
Helix 52
52
B
392 406Right-handed alpha
Helix 53
53
B
409 425Right-handed alpha
Helix 54
54
B
430 443Right-handed alpha
Helix 55
55
B
462 470Right-handed alpha
Helix 56
56
B
471 486Right-handed alpha
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There are 2 sheets in PDB entry 3UMV. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
162 166anti-parallel
Strand 3
A
132 135parallel
Strand 4
A
40 44parallel
Strand 5
A
70 75parallel
Strand 6
A
111 114parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 30first strand
Strand 2
B
162 166anti-parallel
Strand 3
B
132 135parallel
Strand 4
B
40 44parallel
Strand 5
B
70 75parallel
Strand 6
B
111 114parallel
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