Analysis of interatomic Contacts of Structural Units in PDB entry:
3UO9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UO9 entry

There are 4 chains in PDB entry 3UO9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 137GLU 600
B
 PRO 137GLU 600
C
 LEU 136GLU 600
D
 LEU 139GLU 600
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 82 helices in PDB entry 3UO9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
138 149Right-handed alpha
Helix 2
2
A
156 166Right-handed alpha
Helix 3
3
A
172 174Right-handed 310
Helix 4
4
A
175 189Right-handed alpha
Helix 5
5
A
196 205Right-handed alpha
Helix 6
6
A
207 217Right-handed alpha
Helix 7
7
A
223 241Right-handed alpha
Helix 8
8
A
250 255Right-handed alpha
Helix 9
9
A
285 287Right-handed 310
Helix 10
10
A
288 301Right-handed alpha
Helix 11
11
A
301 306Right-handed alpha
Helix 12
12
A
315 319Right-handed 310
Helix 13
13
A
334 343Right-handed alpha
Helix 14
14
A
350 366Right-handed alpha
Helix 15
15
A
374 384Right-handed alpha
Helix 16
16
A
385 398Right-handed alpha
Helix 17
17
A
406 419Right-handed alpha
Helix 18
18
A
423 436Right-handed alpha
Helix 19
19
A
449 464Right-handed alpha
Helix 20
20
A
465 467Right-handed 310
Helix 21
21
A
468 476Right-handed alpha
Helix 22
22
A
511 525Right-handed alpha
Helix 23
23
B
138 149Right-handed alpha
Helix 24
24
B
156 165Right-handed alpha
Helix 25
25
B
172 174Right-handed 310
Helix 26
26
B
175 187Right-handed alpha
Helix 27
27
B
196 205Right-handed alpha
Helix 28
28
B
207 216Right-handed alpha
Helix 29
29
B
223 240Right-handed alpha
Helix 30
30
B
250 255Right-handed alpha
Helix 31
31
B
287 301Right-handed alpha
Helix 32
32
B
301 309Right-handed alpha
Helix 33
33
B
334 343Right-handed alpha
Helix 34
34
B
350 366Right-handed alpha
Helix 35
35
B
374 385Right-handed alpha
Helix 36
36
B
385 398Right-handed alpha
Helix 37
37
B
406 419Right-handed alpha
Helix 38
38
B
423 436Right-handed alpha
Helix 39
39
B
449 464Right-handed alpha
Helix 40
40
B
465 467Right-handed 310
Helix 41
41
B
468 476Right-handed alpha
Helix 42
42
B
511 525Right-handed alpha
Helix 43
43
C
138 149Right-handed alpha
Helix 44
44
C
156 165Right-handed alpha
Helix 45
45
C
172 174Right-handed 310
Helix 46
46
C
175 187Right-handed alpha
Helix 47
47
C
196 205Right-handed alpha
Helix 48
48
C
207 216Right-handed alpha
Helix 49
49
C
223 240Right-handed alpha
Helix 50
50
C
250 255Right-handed alpha
Helix 51
51
C
287 301Right-handed alpha
Helix 52
52
C
301 306Right-handed alpha
Helix 53
53
C
334 345Right-handed alpha
Helix 54
54
C
350 366Right-handed alpha
Helix 55
55
C
374 384Right-handed alpha
Helix 56
56
C
385 398Right-handed alpha
Helix 57
57
C
406 419Right-handed alpha
Helix 58
58
C
423 436Right-handed alpha
Helix 59
59
C
449 464Right-handed alpha
Helix 60
60
C
465 467Right-handed 310
Helix 61
61
C
468 476Right-handed alpha
Helix 62
62
C
511 525Right-handed alpha
Helix 63
63
D
140 149Right-handed alpha
Helix 64
64
D
156 166Right-handed alpha
Helix 65
65
D
172 174Right-handed 310
Helix 66
66
D
175 189Right-handed alpha
Helix 67
67
D
197 205Right-handed alpha
Helix 68
68
D
207 217Right-handed alpha
Helix 69
69
D
223 241Right-handed alpha
Helix 70
70
D
250 255Right-handed alpha
Helix 71
71
D
287 301Right-handed alpha
Helix 72
72
D
301 307Right-handed alpha
Helix 73
73
D
334 343Right-handed alpha
Helix 74
74
D
350 366Right-handed alpha
Helix 75
75
D
374 384Right-handed alpha
Helix 76
76
D
385 398Right-handed alpha
Helix 77
77
D
406 419Right-handed alpha
Helix 78
78
D
423 436Right-handed alpha
Helix 79
79
D
449 464Right-handed alpha
Helix 80
80
D
465 467Right-handed 310
Helix 81
81
D
468 476Right-handed alpha
Helix 82
82
D
511 525Right-handed alpha
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There are 12 sheets in PDB entry 3UO9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 155first strand
Strand 2
A
194 195anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 276first strand
Strand 2
A
262 267anti-parallel
Strand 3
A
496 501anti-parallel
Strand 4
A
487 492anti-parallel
Strand 5
A
480 482anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
282 283first strand
Strand 2
A
420 422anti-parallel
Strand 3
A
371 373anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 155first strand
Strand 2
B
194 195anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
272 276first strand
Strand 2
B
262 267anti-parallel
Strand 3
B
496 501anti-parallel
Strand 4
B
487 492anti-parallel
Strand 5
B
480 482anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
282 283first strand
Strand 2
B
420 422anti-parallel
Strand 3
B
372 373anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
154 155first strand
Strand 2
C
194 195anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
272 276first strand
Strand 2
C
262 267anti-parallel
Strand 3
C
496 501anti-parallel
Strand 4
C
487 492anti-parallel
Strand 5
C
480 482anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
282 283first strand
Strand 2
C
420 422anti-parallel
Strand 3
C
371 373anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
153 155first strand
Strand 2
D
194 196anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
272 276first strand
Strand 2
D
262 267anti-parallel
Strand 3
D
496 501anti-parallel
Strand 4
D
487 492anti-parallel
Strand 5
D
480 482anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
282 283first strand
Strand 2
D
420 422anti-parallel
Strand 3
D
372 373anti-parallel
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