Analysis of interatomic Contacts of Structural Units in PDB entry:
3UOE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UOE entry

There are 2 chains in PDB entry 3UOE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU -5ALA 333
B
 SER -1ALA 333
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 3UOE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-5 -2Right-handed 310
Helix 2
2
A
4 19Right-handed alpha
Helix 3
3
A
22 39Right-handed alpha
Helix 4
4
A
41 47Right-handed 310
Helix 5
5
A
48 58Right-handed alpha
Helix 6
6
A
85 105Right-handed alpha
Helix 7
7
A
120 130Right-handed alpha
Helix 8
8
A
180 191Right-handed alpha
Helix 9
9
A
209 215Right-handed alpha
Helix 10
10
A
222 242Right-handed alpha
Helix 11
11
A
245 249Right-handed 310
Helix 12
12
A
270 273Right-handed 310
Helix 13
13
A
276 289Right-handed alpha
Helix 14
14
A
303 317Right-handed alpha
Helix 15
15
A
322 333Right-handed alpha
Helix 16
16
B
4 18Right-handed alpha
Helix 17
17
B
22 39Right-handed alpha
Helix 18
18
B
41 47Right-handed 310
Helix 19
19
B
48 58Right-handed alpha
Helix 20
20
B
85 99Right-handed alpha
Helix 21
21
B
100 105Right-handed alpha
Helix 22
22
B
120 130Right-handed alpha
Helix 23
23
B
209 215Right-handed alpha
Helix 24
24
B
222 242Right-handed alpha
Helix 25
25
B
245 249Right-handed 310
Helix 26
26
B
270 273Right-handed 310
Helix 27
27
B
276 289Right-handed alpha
Helix 28
28
B
303 317Right-handed alpha
Helix 29
29
B
322 333Right-handed alpha
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There are 6 sheets in PDB entry 3UOE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
0 3first strand
Strand 2
A
318 321anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 73first strand
Strand 2
A
76 84anti-parallel
Strand 3
A
106 114parallel
Strand 4
A
262 268anti-parallel
Strand 5
A
133 138anti-parallel
Strand 6
A
159 163anti-parallel
Strand 7
A
170 174anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 207first strand
Strand 2
A
199 200anti-parallel
Strand 3
A
217 218anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
0 3first strand
Strand 2
B
318 321anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 73first strand
Strand 2
B
76 80anti-parallel
Strand 3
B
106 112parallel
Strand 4
B
262 268anti-parallel
Strand 5
B
133 138anti-parallel
Strand 6
B
159 163anti-parallel
Strand 7
B
170 174anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
199 201first strand
Strand 2
B
216 218anti-parallel
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