Analysis of interatomic Contacts of Structural Units in PDB entry:
3UOH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UOH entry

There are 2 chains in PDB entry 3UOH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 126LYS 389
B
 ARG 126LYS 389
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3UOH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
129 131Right-handed 310
Helix 2
2
A
166 173Right-handed alpha
Helix 3
3
A
175 187Right-handed alpha
Helix 4
4
A
217 226Right-handed alpha
Helix 5
5
A
229 250Right-handed alpha
Helix 6
6
A
292 296Right-handed 310
Helix 7
7
A
297 302Right-handed alpha
Helix 8
8
A
309 325Right-handed alpha
Helix 9
9
A
333 343Right-handed alpha
Helix 10
10
A
353 364Right-handed alpha
Helix 11
11
A
373 380Right-handed alpha
Helix 12
12
A
380 387Right-handed alpha
Helix 13
13
B
129 131Right-handed 310
Helix 14
14
B
166 173Right-handed alpha
Helix 15
15
B
175 187Right-handed alpha
Helix 16
16
B
217 226Right-handed alpha
Helix 17
17
B
229 250Right-handed alpha
Helix 18
18
B
292 296Right-handed 310
Helix 19
19
B
297 302Right-handed alpha
Helix 20
20
B
309 325Right-handed alpha
Helix 21
21
B
333 343Right-handed alpha
Helix 22
22
B
353 364Right-handed alpha
Helix 23
23
B
373 380Right-handed alpha
Helix 24
24
B
380 387Right-handed alpha
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There are 4 sheets in PDB entry 3UOH. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
196 201first strand
Strand 2
A
206 210anti-parallel
Strand 3
A
158 164anti-parallel
Strand 4
A
146 152anti-parallel
Strand 5
A
133 142anti-parallel
Strand 6
A
279 280anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 264first strand
Strand 2
A
270 272anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
196 201first strand
Strand 2
B
206 210anti-parallel
Strand 3
B
158 164anti-parallel
Strand 4
B
146 152anti-parallel
Strand 5
B
133 142anti-parallel
Strand 6
B
279 280anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
262 264first strand
Strand 2
B
270 272anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il