Analysis of interatomic Contacts of Structural Units in PDB entry:
3UOM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UOM entry

There are 6 chains in PDB entry 3UOM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 3GLU 354
B
 ASP 5GLU 354
C
 LEU 4GLU 354
D
 ASP 5GLU 354
E
 LEU 4GLU 354
F
 ASP 5GLU 354
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 3UOM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 30Right-handed alpha
Helix 2
2
A
44 66Right-handed alpha
Helix 3
3
A
80 88Right-handed alpha
Helix 4
4
A
111 124Right-handed alpha
Helix 5
5
A
132 142Right-handed alpha
Helix 6
6
A
157 171Right-handed alpha
Helix 7
7
A
181 189Right-handed alpha
Helix 8
8
A
214 225Right-handed alpha
Helix 9
9
A
234 236Right-handed 310
Helix 10
10
A
237 243Right-handed alpha
Helix 11
11
A
259 275Right-handed alpha
Helix 12
12
A
288 294Right-handed 310
Helix 13
13
A
295 304Right-handed alpha
Helix 14
14
A
335 349Right-handed alpha
Helix 15
15
B
22 30Right-handed alpha
Helix 16
16
B
44 66Right-handed alpha
Helix 17
17
B
80 88Right-handed alpha
Helix 18
18
B
111 124Right-handed alpha
Helix 19
19
B
132 141Right-handed alpha
Helix 20
20
B
157 171Right-handed alpha
Helix 21
21
B
181 189Right-handed alpha
Helix 22
22
B
214 225Right-handed alpha
Helix 23
23
B
234 236Right-handed 310
Helix 24
24
B
237 244Right-handed alpha
Helix 25
25
B
259 275Right-handed alpha
Helix 26
26
B
288 294Right-handed 310
Helix 27
27
B
295 304Right-handed alpha
Helix 28
28
B
335 349Right-handed alpha
Helix 29
29
C
22 30Right-handed alpha
Helix 30
30
C
44 66Right-handed alpha
Helix 31
31
C
80 88Right-handed alpha
Helix 32
32
C
111 124Right-handed alpha
Helix 33
33
C
132 142Right-handed alpha
Helix 34
34
C
157 171Right-handed alpha
Helix 35
35
C
181 189Right-handed alpha
Helix 36
36
C
214 225Right-handed alpha
Helix 37
37
C
234 236Right-handed 310
Helix 38
38
C
237 244Right-handed alpha
Helix 39
39
C
259 275Right-handed alpha
Helix 40
40
C
288 294Right-handed 310
Helix 41
41
C
295 304Right-handed alpha
Helix 42
42
C
335 349Right-handed alpha
Helix 43
43
D
22 30Right-handed alpha
Helix 44
44
D
44 66Right-handed alpha
Helix 45
45
D
80 88Right-handed alpha
Helix 46
46
D
111 124Right-handed alpha
Helix 47
47
D
132 142Right-handed alpha
Helix 48
48
D
157 171Right-handed alpha
Helix 49
49
D
181 189Right-handed alpha
Helix 50
50
D
214 225Right-handed alpha
Helix 51
51
D
234 236Right-handed 310
Helix 52
52
D
237 244Right-handed alpha
Helix 53
53
D
259 275Right-handed alpha
Helix 54
54
D
288 294Right-handed 310
Helix 55
55
D
295 304Right-handed alpha
Helix 56
56
D
335 349Right-handed alpha
Helix 57
57
E
22 30Right-handed alpha
Helix 58
58
E
44 66Right-handed alpha
Helix 59
59
E
80 88Right-handed alpha
Helix 60
60
E
111 124Right-handed alpha
Helix 61
61
E
132 142Right-handed alpha
Helix 62
62
E
157 171Right-handed alpha
Helix 63
63
E
181 189Right-handed alpha
Helix 64
64
E
214 225Right-handed alpha
Helix 65
65
E
234 236Right-handed 310
Helix 66
66
E
237 244Right-handed alpha
Helix 67
67
E
259 275Right-handed alpha
Helix 68
68
E
288 294Right-handed 310
Helix 69
69
E
295 304Right-handed alpha
Helix 70
70
E
335 349Right-handed alpha
Helix 71
71
F
22 30Right-handed alpha
Helix 72
72
F
44 66Right-handed alpha
Helix 73
73
F
80 88Right-handed alpha
Helix 74
74
F
111 124Right-handed alpha
Helix 75
75
F
132 142Right-handed alpha
Helix 76
76
F
157 171Right-handed alpha
Helix 77
77
F
181 189Right-handed alpha
Helix 78
78
F
214 225Right-handed alpha
Helix 79
79
F
234 236Right-handed 310
Helix 80
80
F
237 244Right-handed alpha
Helix 81
81
F
259 275Right-handed alpha
Helix 82
82
F
288 294Right-handed 310
Helix 83
83
F
295 304Right-handed alpha
Helix 84
84
F
335 349Right-handed alpha
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There are 18 sheets in PDB entry 3UOM. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
70 76parallel
Strand 3
A
32 38parallel
Strand 4
A
94 99anti-parallel
Strand 5
A
102 105anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 129first strand
Strand 2
A
176 179parallel
Strand 3
A
147 151parallel
Strand 4
A
195 198anti-parallel
Strand 5
A
206 207anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 232first strand
Strand 2
A
284 287parallel
Strand 3
A
249 254parallel
Strand 4
A
311 316anti-parallel
Strand 5
A
321 324anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 17first strand
Strand 2
B
70 76parallel
Strand 3
B
32 38parallel
Strand 4
B
94 99anti-parallel
Strand 5
B
102 105anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
127 129first strand
Strand 2
B
176 179parallel
Strand 3
B
147 151parallel
Strand 4
B
195 198anti-parallel
Strand 5
B
206 207anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
230 232first strand
Strand 2
B
284 287parallel
Strand 3
B
249 254parallel
Strand 4
B
311 316anti-parallel
Strand 5
B
321 324anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
15 17first strand
Strand 2
C
70 76parallel
Strand 3
C
32 38parallel
Strand 4
C
94 99anti-parallel
Strand 5
C
102 105anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
127 129first strand
Strand 2
C
176 179parallel
Strand 3
C
147 151parallel
Strand 4
C
195 198anti-parallel
Strand 5
C
206 207anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
230 232first strand
Strand 2
C
284 287parallel
Strand 3
C
249 254parallel
Strand 4
C
311 316anti-parallel
Strand 5
C
321 324anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
15 17first strand
Strand 2
D
70 76parallel
Strand 3
D
32 38parallel
Strand 4
D
94 99anti-parallel
Strand 5
D
102 105anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
127 129first strand
Strand 2
D
176 179parallel
Strand 3
D
147 151parallel
Strand 4
D
195 198anti-parallel
Strand 5
D
206 207anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
230 232first strand
Strand 2
D
284 287parallel
Strand 3
D
249 254parallel
Strand 4
D
311 316anti-parallel
Strand 5
D
321 324anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
15 17first strand
Strand 2
E
70 76parallel
Strand 3
E
32 38parallel
Strand 4
E
94 99anti-parallel
Strand 5
E
102 105anti-parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
127 129first strand
Strand 2
E
176 179parallel
Strand 3
E
147 151parallel
Strand 4
E
195 198anti-parallel
Strand 5
E
206 207anti-parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
230 232first strand
Strand 2
E
284 287parallel
Strand 3
E
249 254parallel
Strand 4
E
311 316anti-parallel
Strand 5
E
321 324anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
15 17first strand
Strand 2
F
70 76parallel
Strand 3
F
32 38parallel
Strand 4
F
94 99anti-parallel
Strand 5
F
102 105anti-parallel
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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
127 129first strand
Strand 2
F
176 179parallel
Strand 3
F
147 151parallel
Strand 4
F
195 198anti-parallel
Strand 5
F
206 207anti-parallel
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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
230 232first strand
Strand 2
F
284 287parallel
Strand 3
F
249 254parallel
Strand 4
F
311 316anti-parallel
Strand 5
F
321 324anti-parallel
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