Analysis of interatomic Contacts of Structural Units in PDB entry:
3UOU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UOU entry

There are 2 chains in PDB entry 3UOU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 27ASN 266
B
 SER 1ARG 54
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 3UOU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
69 74Right-handed alpha
Helix 2
2
A
113 117Right-handed 310
Helix 3
3
A
180 185Right-handed alpha
Helix 4
4
A
190 194Right-handed 310
Helix 5
5
A
255 266Right-handed alpha
Helix 6
6
B
45 53Right-handed alpha
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There are 3 sheets in PDB entry 3UOU. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 32first strand
Strand 2
A
172 175anti-parallel
Strand 3
A
153 157anti-parallel
Strand 4
A
217 222anti-parallel
Strand 5
A
225 234anti-parallel
Strand 6
A
247 251anti-parallel
Strand 7
A
198 201anti-parallel
Strand 8
A
178 179anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 48first strand
Strand 2
A
51 62anti-parallel
Strand 3
A
65 68anti-parallel
Strand 4
A
121 125anti-parallel
Strand 5
A
96 105anti-parallel
Strand 6
A
79 83anti-parallel
Strand 7
A
41 48anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 21first strand
Strand 2
B
28 33anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il