Analysis of interatomic Contacts of Structural Units in PDB entry:
3UQ7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3UQ7 entry

There are 10 chains in PDB entry 3UQ7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 11	ILE 317
B	PRO 11	ILE 317
C	PRO 11	ILE 317
D	PRO 11	ILE 317
E	PRO 11	ILE 317
F	PRO 11	ILE 317
G	PRO 11	ILE 317
H	PRO 11	ILE 317
I	PRO 11	ILE 317
J	PRO 11	ILE 317

There are 68 helices in PDB entry 3UQ7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	60	70	Right-handed alpha
Helix 2	2	A	201	207	Right-handed alpha
Helix 3	3	A	208	219	Right-handed alpha
Helix 4	4	A	220	223	Right-handed 310
Helix 5	5	A	227	253	Right-handed alpha
Helix 6	6	A	260	286	Right-handed alpha
Helix 7	7	A	296	300	Right-handed 310
Helix 8	8	A	312	317	Right-handed alpha
Helix 9	9	B	62	70	Right-handed alpha
Helix 10	10	B	201	207	Right-handed alpha
Helix 11	11	B	208	219	Right-handed alpha
Helix 12	12	B	227	253	Right-handed alpha
Helix 13	13	B	260	286	Right-handed alpha
Helix 14	14	B	296	300	Right-handed 310
Helix 15	15	C	60	70	Right-handed alpha
Helix 16	16	C	201	207	Right-handed alpha
Helix 17	17	C	208	219	Right-handed alpha
Helix 18	18	C	220	223	Right-handed 310
Helix 19	19	C	227	253	Right-handed alpha
Helix 20	20	C	260	286	Right-handed alpha
Helix 21	21	C	296	300	Right-handed 310
Helix 22	22	D	60	70	Right-handed alpha
Helix 23	23	D	201	207	Right-handed alpha
Helix 24	24	D	208	219	Right-handed alpha
Helix 25	25	D	220	223	Right-handed 310
Helix 26	26	D	227	253	Right-handed alpha
Helix 27	27	D	260	286	Right-handed alpha
Helix 28	28	D	296	300	Right-handed 310
Helix 29	29	E	60	70	Right-handed alpha
Helix 30	30	E	201	207	Right-handed alpha
Helix 31	31	E	208	219	Right-handed alpha
Helix 32	32	E	220	223	Right-handed 310
Helix 33	33	E	227	253	Right-handed alpha
Helix 34	34	E	260	286	Right-handed alpha
Helix 35	35	E	296	300	Right-handed 310
Helix 36	36	F	62	70	Right-handed alpha
Helix 37	37	F	201	207	Right-handed alpha
Helix 38	38	F	208	219	Right-handed alpha
Helix 39	39	F	220	223	Right-handed 310
Helix 40	40	F	227	253	Right-handed alpha
Helix 41	41	F	260	286	Right-handed alpha
Helix 42	42	F	296	300	Right-handed 310
Helix 43	43	G	60	70	Right-handed alpha
Helix 44	44	G	201	207	Right-handed alpha
Helix 45	45	G	208	219	Right-handed alpha
Helix 46	46	G	227	253	Right-handed alpha
Helix 47	47	G	260	286	Right-handed alpha
Helix 48	48	G	296	300	Right-handed 310
Helix 49	49	G	312	316	Right-handed 310
Helix 50	50	H	60	70	Right-handed alpha
Helix 51	51	H	201	207	Right-handed alpha
Helix 52	52	H	208	219	Right-handed alpha
Helix 53	53	H	227	253	Right-handed alpha
Helix 54	54	H	260	286	Right-handed alpha
Helix 55	55	H	296	300	Right-handed 310
Helix 56	56	I	60	70	Right-handed alpha
Helix 57	57	I	201	207	Right-handed alpha
Helix 58	58	I	208	219	Right-handed alpha
Helix 59	59	I	220	223	Right-handed 310
Helix 60	60	I	227	253	Right-handed alpha
Helix 61	61	I	260	286	Right-handed alpha
Helix 62	62	I	296	300	Right-handed 310
Helix 63	63	J	62	70	Right-handed alpha
Helix 64	64	J	201	207	Right-handed alpha
Helix 65	65	J	208	219	Right-handed alpha
Helix 66	66	J	227	253	Right-handed alpha
Helix 67	67	J	260	286	Right-handed alpha
Helix 68	68	J	296	300	Right-handed 310

There are 28 sheets in PDB entry 3UQ7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	59	first strand
Strand 2	A	86	94	anti-parallel
Strand 3	A	100	111	anti-parallel
Strand 4	A	32	43	anti-parallel
Strand 5	A	12	27	anti-parallel
Strand 6	A	138	147	parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	78	first strand
Strand 2	A	123	132	anti-parallel
Strand 3	A	187	199	anti-parallel
Strand 4	A	160	162	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	78	first strand
Strand 2	A	123	132	anti-parallel
Strand 3	A	187	199	anti-parallel
Strand 4	A	170	174	anti-parallel

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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	59	first strand
Strand 2	B	86	94	anti-parallel
Strand 3	B	100	111	anti-parallel
Strand 4	B	32	43	anti-parallel
Strand 5	B	12	27	anti-parallel
Strand 6	B	138	147	parallel

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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	78	first strand
Strand 2	B	123	132	anti-parallel
Strand 3	B	187	199	anti-parallel
Strand 4	B	169	174	anti-parallel
Strand 5	I	168	174	parallel
Strand 6	I	187	199	anti-parallel
Strand 7	I	123	132	anti-parallel
Strand 8	I	76	78	anti-parallel

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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	160	162	first strand
Strand 2	B	187	199	anti-parallel
Strand 3	B	169	174	anti-parallel
Strand 4	I	168	174	parallel
Strand 5	I	187	199	anti-parallel
Strand 6	I	160	162	anti-parallel

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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	59	first strand
Strand 2	C	86	94	anti-parallel
Strand 3	C	100	111	anti-parallel
Strand 4	C	32	43	anti-parallel
Strand 5	C	12	27	anti-parallel
Strand 6	C	138	145	parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	76	78	first strand
Strand 2	C	123	132	anti-parallel
Strand 3	C	187	199	anti-parallel
Strand 4	C	160	162	anti-parallel

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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	76	78	first strand
Strand 2	C	123	132	anti-parallel
Strand 3	C	187	199	anti-parallel
Strand 4	C	170	174	anti-parallel

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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	59	first strand
Strand 2	D	86	94	anti-parallel
Strand 3	D	100	111	anti-parallel
Strand 4	D	32	43	anti-parallel
Strand 5	D	12	27	anti-parallel
Strand 6	D	138	145	parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	78	first strand
Strand 2	D	123	132	anti-parallel
Strand 3	D	187	199	anti-parallel
Strand 4	D	160	162	anti-parallel

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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	78	first strand
Strand 2	D	123	132	anti-parallel
Strand 3	D	187	199	anti-parallel
Strand 4	D	170	174	anti-parallel

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There are 6 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	56	59	first strand
Strand 2	E	86	94	anti-parallel
Strand 3	E	100	111	anti-parallel
Strand 4	E	32	43	anti-parallel
Strand 5	E	12	27	anti-parallel
Strand 6	E	138	147	parallel

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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	76	78	first strand
Strand 2	E	123	132	anti-parallel
Strand 3	E	187	199	anti-parallel
Strand 4	E	160	162	anti-parallel

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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	76	78	first strand
Strand 2	E	123	132	anti-parallel
Strand 3	E	187	199	anti-parallel
Strand 4	E	170	174	anti-parallel

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There are 6 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	56	59	first strand
Strand 2	F	86	94	anti-parallel
Strand 3	F	100	111	anti-parallel
Strand 4	F	32	43	anti-parallel
Strand 5	F	12	27	anti-parallel
Strand 6	F	138	147	parallel

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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	76	78	first strand
Strand 2	F	123	132	anti-parallel
Strand 3	F	187	199	anti-parallel
Strand 4	F	160	162	anti-parallel

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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	76	78	first strand
Strand 2	F	123	132	anti-parallel
Strand 3	F	187	199	anti-parallel
Strand 4	F	170	174	anti-parallel

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There are 6 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	56	59	first strand
Strand 2	G	86	94	anti-parallel
Strand 3	G	100	111	anti-parallel
Strand 4	G	32	43	anti-parallel
Strand 5	G	12	27	anti-parallel
Strand 6	G	138	145	parallel

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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	76	78	first strand
Strand 2	G	123	132	anti-parallel
Strand 3	G	187	199	anti-parallel
Strand 4	G	160	162	anti-parallel

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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	76	78	first strand
Strand 2	G	123	132	anti-parallel
Strand 3	G	187	199	anti-parallel
Strand 4	G	170	174	anti-parallel

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There are 6 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	56	59	first strand
Strand 2	H	86	94	anti-parallel
Strand 3	H	100	111	anti-parallel
Strand 4	H	32	43	anti-parallel
Strand 5	H	12	27	anti-parallel
Strand 6	H	138	147	parallel

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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	76	78	first strand
Strand 2	H	123	132	anti-parallel
Strand 3	H	187	199	anti-parallel
Strand 4	H	160	162	anti-parallel

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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	76	78	first strand
Strand 2	H	123	132	anti-parallel
Strand 3	H	187	199	anti-parallel
Strand 4	H	170	174	anti-parallel

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There are 6 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	56	59	first strand
Strand 2	I	86	94	anti-parallel
Strand 3	I	100	111	anti-parallel
Strand 4	I	32	43	anti-parallel
Strand 5	I	12	27	anti-parallel
Strand 6	I	138	145	parallel

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There are 6 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	56	59	first strand
Strand 2	J	86	94	anti-parallel
Strand 3	J	100	111	anti-parallel
Strand 4	J	32	43	anti-parallel
Strand 5	J	12	27	anti-parallel
Strand 6	J	138	145	parallel

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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	76	78	first strand
Strand 2	J	123	132	anti-parallel
Strand 3	J	187	199	anti-parallel
Strand 4	J	160	162	anti-parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	76	78	first strand
Strand 2	J	123	132	anti-parallel
Strand 3	J	187	199	anti-parallel
Strand 4	J	170	174	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3UQ7

Analysis of interatomic Contacts of Structural Units in PDB entry:
3UQ7