Analysis of interatomic Contacts of Structural Units in PDB entry:
3UR3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UR3 entry

There is 1 chain in PDB entry 3UR3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 VAL 216PRO 871
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 28 helices in PDB entry 3UR3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
238 264Right-handed alpha
Helix 2
2
C
265 267Right-handed 310
Helix 3
3
C
277 284Right-handed alpha
Helix 4
4
C
289 295Right-handed 310
Helix 5
5
C
310 340Right-handed alpha
Helix 6
6
C
346 348Right-handed 310
Helix 7
7
C
349 354Right-handed alpha
Helix 8
8
C
355 365Right-handed alpha
Helix 9
9
C
416 434Right-handed alpha
Helix 10
10
C
463 469Right-handed alpha
Helix 11
11
C
478 495Right-handed alpha
Helix 12
12
C
503 509Right-handed alpha
Helix 13
13
C
510 512Right-handed 310
Helix 14
14
C
513 534Right-handed alpha
Helix 15
15
C
545 549Right-handed 310
Helix 16
16
C
550 556Right-handed alpha
Helix 17
17
C
570 588Right-handed alpha
Helix 18
18
C
639 655Right-handed alpha
Helix 19
19
C
655 662Right-handed alpha
Helix 20
20
C
683 698Right-handed alpha
Helix 21
21
C
722 737Right-handed alpha
Helix 22
22
C
738 741Right-handed 310
Helix 23
23
C
765 773Right-handed alpha
Helix 24
24
C
774 780Right-handed alpha
Helix 25
25
C
790 800Right-handed alpha
Helix 26
26
C
807 820Right-handed alpha
Helix 27
27
C
826 844Right-handed alpha
Helix 28
28
C
849 866Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 3UR3. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
269 271first strand
Strand 2
C
301 307anti-parallel
Strand 3
C
219 228anti-parallel
Strand 4
C
366 374anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
538 539first strand
Strand 2
C
542 543anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
666 671first strand
Strand 2
C
674 680anti-parallel
Strand 3
C
593 601anti-parallel
Strand 4
C
710 718anti-parallel
Strand 5
C
746 752parallel
Strand 6
C
758 764anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il