Analysis of interatomic Contacts of Structural Units in PDB entry:
3UT0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3UT0 entry

There are 2 chains in PDB entry 3UT0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 5	HIS 816
B	GLN 5	GLU 493

There are120 helices in PDB entry 3UT0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	18	32	Right-handed alpha
Helix 2	2	A	33	41	Right-handed alpha
Helix 3	3	A	50	58	Right-handed alpha
Helix 4	4	A	69	73	Right-handed 310
Helix 5	5	A	77	94	Right-handed alpha
Helix 6	6	A	125	133	Right-handed alpha
Helix 7	7	A	134	151	Right-handed alpha
Helix 8	8	A	172	176	Right-handed 310
Helix 9	9	A	180	197	Right-handed alpha
Helix 10	10	A	218	226	Right-handed 310
Helix 11	11	A	234	243	Right-handed alpha
Helix 12	12	A	243	252	Right-handed alpha
Helix 13	13	A	272	277	Right-handed alpha
Helix 14	14	A	295	300	Right-handed 310
Helix 15	15	A	308	315	Right-handed alpha
Helix 16	16	A	324	338	Right-handed alpha
Helix 17	17	A	342	361	Right-handed alpha
Helix 18	18	A	367	375	Right-handed 310
Helix 19	19	A	376	380	Right-handed 310
Helix 20	20	A	382	397	Right-handed alpha
Helix 21	21	A	404	406	Right-handed 310
Helix 22	22	A	424	430	Right-handed alpha
Helix 23	23	A	442	446	Right-handed 310
Helix 24	24	A	451	463	Right-handed alpha
Helix 25	25	A	492	497	Right-handed 310
Helix 26	26	A	508	520	Right-handed alpha
Helix 27	27	A	536	542	Right-handed alpha
Helix 28	28	A	556	564	Right-handed alpha
Helix 29	29	A	708	712	Right-handed 310
Helix 30	30	A	748	754	Right-handed 310
Helix 31	31	B	18	32	Right-handed alpha
Helix 32	32	B	33	41	Right-handed alpha
Helix 33	33	B	50	58	Right-handed alpha
Helix 34	34	B	69	73	Right-handed 310
Helix 35	35	B	77	94	Right-handed alpha
Helix 36	36	B	125	133	Right-handed alpha
Helix 37	37	B	134	151	Right-handed alpha
Helix 38	38	B	172	176	Right-handed 310
Helix 39	39	B	180	197	Right-handed alpha
Helix 40	40	B	218	226	Right-handed 310
Helix 41	41	B	234	243	Right-handed alpha
Helix 42	42	B	243	252	Right-handed alpha
Helix 43	43	B	272	277	Right-handed alpha
Helix 44	44	B	295	300	Right-handed 310
Helix 45	45	B	308	315	Right-handed alpha
Helix 46	46	B	324	338	Right-handed alpha
Helix 47	47	B	342	361	Right-handed alpha
Helix 48	48	B	367	375	Right-handed 310
Helix 49	49	B	376	380	Right-handed 310
Helix 50	50	B	382	397	Right-handed alpha
Helix 51	51	B	404	406	Right-handed 310
Helix 52	52	B	424	430	Right-handed alpha
Helix 53	53	B	442	446	Right-handed 310
Helix 54	54	B	451	463	Right-handed alpha
Helix 55	55	B	492	497	Right-handed 310
Helix 56	56	B	508	520	Right-handed alpha
Helix 57	57	B	536	542	Right-handed alpha
Helix 58	58	B	556	564	Right-handed alpha
Helix 59	59	B	708	712	Right-handed 310
Helix 60	60	B	748	754	Right-handed 310
Helix 61	61	C	18	32	Right-handed alpha
Helix 62	62	C	33	41	Right-handed alpha
Helix 63	63	C	50	58	Right-handed alpha
Helix 64	64	C	69	73	Right-handed 310
Helix 65	65	C	77	94	Right-handed alpha
Helix 66	66	C	125	133	Right-handed alpha
Helix 67	67	C	134	151	Right-handed alpha
Helix 68	68	C	172	176	Right-handed 310
Helix 69	69	C	180	197	Right-handed alpha
Helix 70	70	C	218	226	Right-handed 310
Helix 71	71	C	234	243	Right-handed alpha
Helix 72	72	C	243	252	Right-handed alpha
Helix 73	73	C	272	277	Right-handed alpha
Helix 74	74	C	295	300	Right-handed 310
Helix 75	75	C	308	315	Right-handed alpha
Helix 76	76	C	324	338	Right-handed alpha
Helix 77	77	C	342	361	Right-handed alpha
Helix 78	78	C	367	375	Right-handed 310
Helix 79	79	C	376	380	Right-handed 310
Helix 80	80	C	382	397	Right-handed alpha
Helix 81	81	C	404	406	Right-handed 310
Helix 82	82	C	424	430	Right-handed alpha
Helix 83	83	C	442	446	Right-handed 310
Helix 84	84	C	451	463	Right-handed alpha
Helix 85	85	C	492	497	Right-handed 310
Helix 86	86	C	508	520	Right-handed alpha
Helix 87	87	C	536	542	Right-handed alpha
Helix 88	88	C	556	564	Right-handed alpha
Helix 89	89	C	708	712	Right-handed 310
Helix 90	90	C	748	754	Right-handed 310
Helix 91	91	D	18	32	Right-handed alpha
Helix 92	92	D	33	41	Right-handed alpha
Helix 93	93	D	50	58	Right-handed alpha
Helix 94	94	D	69	73	Right-handed 310
Helix 95	95	D	77	94	Right-handed alpha
Helix 96	96	D	125	133	Right-handed alpha
Helix 97	97	D	134	151	Right-handed alpha
Helix 98	98	D	172	176	Right-handed 310
Helix 99	99	D	180	197	Right-handed alpha
Helix 100	100	D	218	226	Right-handed 310
Helix 101	101	D	234	243	Right-handed alpha
Helix 102	102	D	243	252	Right-handed alpha
Helix 103	103	D	272	277	Right-handed alpha
Helix 104	104	D	295	300	Right-handed 310
Helix 105	105	D	308	315	Right-handed alpha
Helix 106	106	D	324	338	Right-handed alpha
Helix 107	107	D	342	361	Right-handed alpha
Helix 108	108	D	367	375	Right-handed 310
Helix 109	109	D	376	380	Right-handed 310
Helix 110	110	D	382	397	Right-handed alpha
Helix 111	111	D	404	406	Right-handed 310
Helix 112	112	D	424	430	Right-handed alpha
Helix 113	113	D	442	446	Right-handed 310
Helix 114	114	D	451	463	Right-handed alpha
Helix 115	115	D	492	497	Right-handed 310
Helix 116	116	D	508	520	Right-handed alpha
Helix 117	117	D	536	542	Right-handed alpha
Helix 118	118	D	556	564	Right-handed alpha
Helix 119	119	D	708	712	Right-handed 310
Helix 120	120	D	748	754	Right-handed 310

There are 28 sheets in PDB entry 3UT0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	43	first strand
Strand 2	A	319	320	parallel

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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	64	first strand
Strand 2	A	105	109	parallel
Strand 3	A	156	161	parallel
Strand 4	A	210	216	parallel
Strand 5	A	256	259	parallel
Strand 6	A	289	291	parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	230	231	first strand
Strand 2	A	263	264	parallel
Strand 3	A	267	268	anti-parallel

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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	398	402	first strand
Strand 2	A	545	550	anti-parallel
Strand 3	A	524	529	parallel
Strand 4	A	481	487	parallel
Strand 5	A	414	418	parallel
Strand 6	A	466	469	parallel

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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	635	638	first strand
Strand 2	A	789	799	anti-parallel
Strand 3	A	686	691	anti-parallel
Strand 4	A	673	678	anti-parallel
Strand 5	A	665	666	anti-parallel

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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	635	638	first strand
Strand 2	A	789	799	anti-parallel
Strand 3	A	715	724	anti-parallel
Strand 4	A	759	765	anti-parallel
Strand 5	A	807	808	parallel

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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	658	660	first strand
Strand 2	A	646	652	anti-parallel
Strand 3	A	695	705	anti-parallel
Strand 4	A	778	786	anti-parallel
Strand 5	A	730	736	anti-parallel
Strand 6	A	741	746	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	43	first strand
Strand 2	B	319	320	parallel

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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	64	first strand
Strand 2	B	106	109	parallel
Strand 3	B	156	161	parallel
Strand 4	B	210	216	parallel
Strand 5	B	256	259	parallel
Strand 6	B	289	291	parallel

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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	230	231	first strand
Strand 2	B	263	264	parallel
Strand 3	B	267	268	anti-parallel

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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	398	402	first strand
Strand 2	B	545	550	anti-parallel
Strand 3	B	524	529	parallel
Strand 4	B	481	487	parallel
Strand 5	B	414	418	parallel
Strand 6	B	466	469	parallel

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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	635	638	first strand
Strand 2	B	789	799	anti-parallel
Strand 3	B	686	691	anti-parallel
Strand 4	B	673	678	anti-parallel
Strand 5	B	665	666	anti-parallel

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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	635	638	first strand
Strand 2	B	789	799	anti-parallel
Strand 3	B	715	724	anti-parallel
Strand 4	B	759	765	anti-parallel
Strand 5	B	807	808	parallel

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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	658	660	first strand
Strand 2	B	646	652	anti-parallel
Strand 3	B	695	705	anti-parallel
Strand 4	B	778	786	anti-parallel
Strand 5	B	731	736	anti-parallel
Strand 6	B	741	746	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	43	first strand
Strand 2	C	319	320	parallel

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There are 6 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	64	first strand
Strand 2	C	106	109	parallel
Strand 3	C	156	161	parallel
Strand 4	C	210	216	parallel
Strand 5	C	256	259	parallel
Strand 6	C	289	291	parallel

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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	230	231	first strand
Strand 2	C	263	264	parallel
Strand 3	C	267	268	anti-parallel

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There are 6 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	398	402	first strand
Strand 2	C	545	550	anti-parallel
Strand 3	C	524	529	parallel
Strand 4	C	481	487	parallel
Strand 5	C	414	418	parallel
Strand 6	C	466	469	parallel

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There are 5 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	635	638	first strand
Strand 2	C	789	799	anti-parallel
Strand 3	C	686	691	anti-parallel
Strand 4	C	673	678	anti-parallel
Strand 5	C	665	666	anti-parallel

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There are 5 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	635	638	first strand
Strand 2	C	789	799	anti-parallel
Strand 3	C	715	724	anti-parallel
Strand 4	C	759	765	anti-parallel
Strand 5	C	807	808	parallel

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There are 6 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	658	660	first strand
Strand 2	C	646	651	anti-parallel
Strand 3	C	695	706	anti-parallel
Strand 4	C	777	786	anti-parallel
Strand 5	C	730	736	anti-parallel
Strand 6	C	741	746	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	42	43	first strand
Strand 2	D	319	320	parallel

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There are 6 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	61	64	first strand
Strand 2	D	105	109	parallel
Strand 3	D	156	161	parallel
Strand 4	D	210	216	parallel
Strand 5	D	256	259	parallel
Strand 6	D	289	291	parallel

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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	230	231	first strand
Strand 2	D	263	264	parallel
Strand 3	D	267	268	anti-parallel

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There are 6 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	398	402	first strand
Strand 2	D	545	550	anti-parallel
Strand 3	D	524	529	parallel
Strand 4	D	481	487	parallel
Strand 5	D	414	418	parallel
Strand 6	D	466	469	parallel

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There are 5 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	635	638	first strand
Strand 2	D	789	799	anti-parallel
Strand 3	D	686	691	anti-parallel
Strand 4	D	673	678	anti-parallel
Strand 5	D	665	666	anti-parallel

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There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	635	638	first strand
Strand 2	D	789	799	anti-parallel
Strand 3	D	715	724	anti-parallel
Strand 4	D	759	765	anti-parallel
Strand 5	D	807	808	parallel

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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	658	660	first strand
Strand 2	D	646	651	anti-parallel
Strand 3	D	695	705	anti-parallel
Strand 4	D	778	786	anti-parallel
Strand 5	D	730	736	anti-parallel
Strand 6	D	741	746	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3UT0

Analysis of interatomic Contacts of Structural Units in PDB entry:
3UT0