Analysis of interatomic Contacts of Structural Units in PDB entry:
3UT2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3UT2 entry

There are 4 chains in PDB entry 3UT2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 50	ALA 139
A	HIS 141	VAL 784
B	THR 51	ALA 139
B	HIS 141	ASP 604

There are 85 helices in PDB entry 3UT2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	67	72	Right-handed alpha
Helix 2	2	A	78	82	Right-handed 310
Helix 3	3	A	85	89	Right-handed 310
Helix 4	4	A	96	103	Right-handed alpha
Helix 5	5	A	105	118	Right-handed alpha
Helix 6	6	A	126	130	Right-handed 310
Helix 7	7	A	131	144	Right-handed alpha
Helix 8	8	A	158	162	Right-handed 310
Helix 9	9	A	164	172	Right-handed 310
Helix 10	10	A	173	189	Right-handed alpha
Helix 11	11	A	190	192	Right-handed 310
Helix 12	12	A	193	209	Right-handed alpha
Helix 13	13	A	256	260	Right-handed 310
Helix 14	14	A	278	282	Right-handed 310
Helix 15	15	A	284	299	Right-handed alpha
Helix 16	16	A	302	314	Right-handed alpha
Helix 17	17	A	324	328	Right-handed 310
Helix 18	18	A	331	335	Right-handed 310
Helix 19	19	A	336	340	Right-handed 310
Helix 20	20	A	352	356	Right-handed 310
Helix 21	21	A	374	383	Right-handed alpha
Helix 22	22	A	421	426	Right-handed alpha
Helix 23	23	A	427	429	Right-handed 310
Helix 24	24	A	430	443	Right-handed alpha
Helix 25	25	A	443	461	Right-handed alpha
Helix 26	26	A	465	469	Right-handed 310
Helix 27	27	A	479	483	Right-handed 310
Helix 28	28	A	494	507	Right-handed alpha
Helix 29	29	A	512	525	Right-handed alpha
Helix 30	30	A	539	543	Right-handed 310
Helix 31	31	A	545	552	Right-handed 310
Helix 32	32	A	553	572	Right-handed alpha
Helix 33	33	A	581	601	Right-handed alpha
Helix 34	34	A	617	621	Right-handed 310
Helix 35	35	A	622	628	Right-handed alpha
Helix 36	36	A	647	659	Right-handed alpha
Helix 37	37	A	662	676	Right-handed alpha
Helix 38	38	A	697	704	Right-handed alpha
Helix 39	39	A	736	740	Right-handed alpha
Helix 40	40	A	741	743	Right-handed 310
Helix 41	41	A	744	756	Right-handed alpha
Helix 42	42	A	759	776	Right-handed alpha
Helix 43	43	B	67	72	Right-handed alpha
Helix 44	44	B	78	82	Right-handed 310
Helix 45	45	B	85	89	Right-handed 310
Helix 46	46	B	96	103	Right-handed alpha
Helix 47	47	B	105	118	Right-handed alpha
Helix 48	48	B	126	130	Right-handed 310
Helix 49	49	B	131	144	Right-handed alpha
Helix 50	50	B	158	162	Right-handed 310
Helix 51	51	B	164	172	Right-handed 310
Helix 52	52	B	173	189	Right-handed alpha
Helix 53	53	B	190	192	Right-handed 310
Helix 54	54	B	193	208	Right-handed alpha
Helix 55	55	B	244	248	Right-handed 310
Helix 56	56	B	256	260	Right-handed 310
Helix 57	57	B	278	282	Right-handed 310
Helix 58	58	B	284	299	Right-handed alpha
Helix 59	59	B	302	314	Right-handed alpha
Helix 60	60	B	324	328	Right-handed 310
Helix 61	61	B	331	335	Right-handed 310
Helix 62	62	B	336	340	Right-handed 310
Helix 63	63	B	352	356	Right-handed 310
Helix 64	64	B	374	383	Right-handed alpha
Helix 65	65	B	421	426	Right-handed alpha
Helix 66	66	B	427	429	Right-handed 310
Helix 67	67	B	430	443	Right-handed alpha
Helix 68	68	B	443	461	Right-handed alpha
Helix 69	69	B	465	469	Right-handed 310
Helix 70	70	B	479	483	Right-handed 310
Helix 71	71	B	494	506	Right-handed alpha
Helix 72	72	B	512	525	Right-handed alpha
Helix 73	73	B	539	543	Right-handed 310
Helix 74	74	B	545	552	Right-handed 310
Helix 75	75	B	553	572	Right-handed alpha
Helix 76	76	B	581	601	Right-handed alpha
Helix 77	77	B	622	628	Right-handed alpha
Helix 78	78	B	635	638	Right-handed 310
Helix 79	79	B	647	659	Right-handed alpha
Helix 80	80	B	662	676	Right-handed alpha
Helix 81	81	B	697	704	Right-handed alpha
Helix 82	82	B	736	740	Right-handed alpha
Helix 83	83	B	741	743	Right-handed 310
Helix 84	84	B	744	756	Right-handed alpha
Helix 85	85	B	759	776	Right-handed alpha

There are 8 sheets in PDB entry 3UT2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	386	389	first strand
Strand 2	A	395	398	anti-parallel
Strand 3	A	419	420	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	406	408	first strand
Strand 2	A	411	416	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	633	634	first strand
Strand 2	A	639	640	anti-parallel

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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	708	712	first strand
Strand 2	A	719	724	anti-parallel
Strand 3	A	730	735	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	386	389	first strand
Strand 2	B	395	398	anti-parallel
Strand 3	B	419	420	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	406	407	first strand
Strand 2	B	415	416	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	633	634	first strand
Strand 2	B	639	640	anti-parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	708	712	first strand
Strand 2	B	719	724	anti-parallel
Strand 3	B	730	735	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3UT2

Analysis of interatomic Contacts of Structural Units in PDB entry:
3UT2