Analysis of interatomic Contacts of Structural Units in PDB entry:
3UT5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UT5 entry

There are 3 chains in PDB entry 3UT5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 440
B
 MET 1GLU 442
C
 MET 1GLY 412
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 3UT5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 28Right-handed alpha
Helix 2
2
A
47 51Right-handed 310
Helix 3
3
A
72 81Right-handed alpha
Helix 4
4
A
88 90Right-handed 310
Helix 5
5
A
102 108Right-handed alpha
Helix 6
6
A
110 113Right-handed 310
Helix 7
7
A
114 128Right-handed alpha
Helix 8
8
A
143 161Right-handed alpha
Helix 9
9
A
182 195Right-handed alpha
Helix 10
10
A
206 216Right-handed alpha
Helix 11
11
A
223 244Right-handed alpha
Helix 12
12
A
251 260Right-handed alpha
Helix 13
13
A
289 294Right-handed alpha
Helix 14
14
A
295 301Right-handed 310
Helix 15
15
A
324 337Right-handed alpha
Helix 16
16
A
384 401Right-handed alpha
Helix 17
17
A
404 410Right-handed alpha
Helix 18
18
A
414 437Right-handed alpha
Helix 19
19
B
10 28Right-handed alpha
Helix 20
20
B
40 44Right-handed 310
Helix 21
21
B
48 51Right-handed 310
Helix 22
22
B
72 81Right-handed alpha
Helix 23
23
B
88 90Right-handed 310
Helix 24
24
B
102 108Right-handed alpha
Helix 25
25
B
109 128Right-handed alpha
Helix 26
26
B
144 161Right-handed alpha
Helix 27
27
B
182 198Right-handed alpha
Helix 28
28
B
206 216Right-handed alpha
Helix 29
29
B
223 244Right-handed alpha
Helix 30
30
B
251 260Right-handed alpha
Helix 31
31
B
287 296Right-handed alpha
Helix 32
32
B
297 301Right-handed 310
Helix 33
33
B
306 310Right-handed 310
Helix 34
34
B
324 339Right-handed alpha
Helix 35
35
B
340 343Right-handed 310
Helix 36
36
B
384 400Right-handed alpha
Helix 37
37
B
405 410Right-handed alpha
Helix 38
38
B
414 438Right-handed alpha
Helix 39
39
C
10 28Right-handed alpha
Helix 40
40
C
47 51Right-handed 310
Helix 41
41
C
72 81Right-handed alpha
Helix 42
42
C
88 90Right-handed 310
Helix 43
43
C
102 108Right-handed alpha
Helix 44
44
C
110 113Right-handed 310
Helix 45
45
C
114 128Right-handed alpha
Helix 46
46
C
143 162Right-handed alpha
Helix 47
47
C
182 195Right-handed alpha
Helix 48
48
C
206 216Right-handed alpha
Helix 49
49
C
223 244Right-handed alpha
Helix 50
50
C
251 260Right-handed alpha
Helix 51
51
C
281 285Right-handed 310
Helix 52
52
C
287 295Right-handed alpha
Helix 53
53
C
296 301Right-handed 310
Helix 54
54
C
324 333Right-handed alpha
Helix 55
55
C
334 339Right-handed alpha
Helix 56
56
C
384 401Right-handed alpha
Helix 57
57
C
404 410Right-handed alpha
Helix 58
58
C
414 435Right-handed alpha
Helix 59
59
D
10 28Right-handed alpha
Helix 60
60
D
41 48Right-handed alpha
Helix 61
61
D
49 51Right-handed 310
Helix 62
62
D
72 81Right-handed alpha
Helix 63
63
D
88 90Right-handed 310
Helix 64
64
D
102 108Right-handed alpha
Helix 65
65
D
109 128Right-handed alpha
Helix 66
66
D
144 161Right-handed alpha
Helix 67
67
D
182 198Right-handed alpha
Helix 68
68
D
206 216Right-handed alpha
Helix 69
69
D
223 244Right-handed alpha
Helix 70
70
D
251 260Right-handed alpha
Helix 71
71
D
287 294Right-handed alpha
Helix 72
72
D
295 296Right-handed 310
Helix 73
73
D
297 301Right-handed 310
Helix 74
74
D
306 310Right-handed 310
Helix 75
75
D
324 339Right-handed alpha
Helix 76
76
D
340 343Right-handed 310
Helix 77
77
D
384 400Right-handed alpha
Helix 78
78
D
405 410Right-handed alpha
Helix 79
79
D
414 438Right-handed alpha
Helix 80
80
E
46 138Right-handed alpha
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There are 11 sheets in PDB entry 3UT5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 94first strand
Strand 2
A
65 69parallel
Strand 3
A
4 9parallel
Strand 4
A
134 140parallel
Strand 5
A
165 172parallel
Strand 6
A
200 205parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
61 63anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 273first strand
Strand 2
A
373 381anti-parallel
Strand 3
A
312 321anti-parallel
Strand 4
A
349 356parallel
Strand 5
E
17 25anti-parallel
Strand 6
E
7 8anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 273first strand
Strand 2
A
373 381anti-parallel
Strand 3
A
312 321anti-parallel
Strand 4
A
349 356parallel
Strand 5
E
17 25anti-parallel
Strand 6
E
13 14anti-parallel
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There are 10 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 94first strand
Strand 2
B
65 69parallel
Strand 3
B
3 9parallel
Strand 4
B
132 140parallel
Strand 5
B
165 172parallel
Strand 6
B
200 205parallel
Strand 7
B
267 273parallel
Strand 8
B
373 381anti-parallel
Strand 9
B
312 321anti-parallel
Strand 10
B
351 356parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 56first strand
Strand 2
B
60 63anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
92 94first strand
Strand 2
C
65 69parallel
Strand 3
C
4 9parallel
Strand 4
C
134 140parallel
Strand 5
C
165 172parallel
Strand 6
C
200 205parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 55first strand
Strand 2
C
61 63anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
269 273first strand
Strand 2
C
373 381anti-parallel
Strand 3
C
312 321anti-parallel
Strand 4
C
352 356parallel
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There are 10 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
92 94first strand
Strand 2
D
65 69parallel
Strand 3
D
3 9parallel
Strand 4
D
132 140parallel
Strand 5
D
165 172parallel
Strand 6
D
200 205parallel
Strand 7
D
267 273parallel
Strand 8
D
373 381anti-parallel
Strand 9
D
312 321anti-parallel
Strand 10
D
351 356parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 55first strand
Strand 2
D
61 63anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il