Analysis of interatomic Contacts of Structural Units in PDB entry:
3UUW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UUW entry

There are 4 chains in PDB entry 3UUW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2LYS 305
B
 LYS 2VAL 304
C
 LYS 2VAL 304
D
 LYS 2LYS 282
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 3UUW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 19Right-handed alpha
Helix 2
2
A
19 24Right-handed alpha
Helix 3
3
A
38 50Right-handed alpha
Helix 4
4
A
56 62Right-handed alpha
Helix 5
5
A
72 74Right-handed 310
Helix 6
6
A
75 86Right-handed alpha
Helix 7
7
A
99 114Right-handed alpha
Helix 8
8
A
121 125Right-handed 310
Helix 9
9
A
126 136Right-handed alpha
Helix 10
10
A
156 164Right-handed alpha
Helix 11
11
A
164 177Right-handed alpha
Helix 12
12
A
259 264Right-handed alpha
Helix 13
13
A
265 279Right-handed alpha
Helix 14
14
A
286 290Right-handed 310
Helix 15
15
A
291 303Right-handed alpha
Helix 16
16
B
12 19Right-handed alpha
Helix 17
17
B
19 24Right-handed alpha
Helix 18
18
B
38 50Right-handed alpha
Helix 19
19
B
56 62Right-handed alpha
Helix 20
20
B
72 74Right-handed 310
Helix 21
21
B
75 86Right-handed alpha
Helix 22
22
B
99 114Right-handed alpha
Helix 23
23
B
121 125Right-handed 310
Helix 24
24
B
126 136Right-handed alpha
Helix 25
25
B
156 164Right-handed alpha
Helix 26
26
B
164 177Right-handed alpha
Helix 27
27
B
259 264Right-handed alpha
Helix 28
28
B
265 279Right-handed alpha
Helix 29
29
B
286 290Right-handed 310
Helix 30
30
B
291 304Right-handed alpha
Helix 31
31
C
12 19Right-handed alpha
Helix 32
32
C
19 24Right-handed alpha
Helix 33
33
C
38 50Right-handed alpha
Helix 34
34
C
56 62Right-handed alpha
Helix 35
35
C
72 74Right-handed 310
Helix 36
36
C
75 86Right-handed alpha
Helix 37
37
C
99 114Right-handed alpha
Helix 38
38
C
121 125Right-handed 310
Helix 39
39
C
126 136Right-handed alpha
Helix 40
40
C
156 164Right-handed alpha
Helix 41
41
C
164 177Right-handed alpha
Helix 42
42
C
259 264Right-handed alpha
Helix 43
43
C
265 279Right-handed alpha
Helix 44
44
C
286 290Right-handed 310
Helix 45
45
C
291 304Right-handed alpha
Helix 46
46
D
12 19Right-handed alpha
Helix 47
47
D
19 24Right-handed alpha
Helix 48
48
D
38 50Right-handed alpha
Helix 49
49
D
56 62Right-handed alpha
Helix 50
50
D
72 86Right-handed alpha
Helix 51
51
D
99 113Right-handed alpha
Helix 52
52
D
121 125Right-handed 310
Helix 53
53
D
126 136Right-handed alpha
Helix 54
54
D
156 164Right-handed alpha
Helix 55
55
D
164 177Right-handed alpha
Helix 56
56
D
259 264Right-handed alpha
Helix 57
57
D
265 279Right-handed alpha
Helix 58
58
D
286 290Right-handed 310
Helix 59
59
D
291 304Right-handed alpha
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There are 6 sheets in PDB entry 3UUW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 35first strand
Strand 2
A
5 9parallel
Strand 3
A
66 69parallel
Strand 4
A
89 92parallel
Strand 5
A
117 119parallel
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There are 16 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 189first strand
Strand 2
A
195 203anti-parallel
Strand 3
A
208 214anti-parallel
Strand 4
A
139 147parallel
Strand 5
A
221 228anti-parallel
Strand 6
A
231 236anti-parallel
Strand 7
A
240 245anti-parallel
Strand 8
A
248 253anti-parallel
Strand 9
D
248 253anti-parallel
Strand 10
D
240 245anti-parallel
Strand 11
D
231 236anti-parallel
Strand 12
D
221 228anti-parallel
Strand 13
D
139 147anti-parallel
Strand 14
D
208 214parallel
Strand 15
D
195 203anti-parallel
Strand 16
D
181 189anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 35first strand
Strand 2
B
5 9parallel
Strand 3
B
66 69parallel
Strand 4
B
89 92parallel
Strand 5
B
117 119parallel
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There are 16 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 189first strand
Strand 2
B
195 203anti-parallel
Strand 3
B
208 214anti-parallel
Strand 4
B
139 147parallel
Strand 5
B
221 228anti-parallel
Strand 6
B
231 236anti-parallel
Strand 7
B
240 245anti-parallel
Strand 8
B
248 253anti-parallel
Strand 9
C
248 253anti-parallel
Strand 10
C
240 245anti-parallel
Strand 11
C
231 236anti-parallel
Strand 12
C
221 228anti-parallel
Strand 13
C
139 147anti-parallel
Strand 14
C
208 214parallel
Strand 15
C
195 203anti-parallel
Strand 16
C
181 189anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 35first strand
Strand 2
C
5 9parallel
Strand 3
C
66 69parallel
Strand 4
C
89 92parallel
Strand 5
C
117 119parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 35first strand
Strand 2
D
5 9parallel
Strand 3
D
66 69parallel
Strand 4
D
89 92parallel
Strand 5
D
117 119parallel
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