Analysis of interatomic Contacts of Structural Units in PDB entry:
3UW3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UW3 entry

There are 2 chains in PDB entry 3UW3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1ASP 372
B
 GLY -1LYS 373
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 3UW3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 23Right-handed alpha
Helix 2
2
A
24 29Right-handed 310
Helix 3
3
A
58 64Right-handed alpha
Helix 4
4
A
73 87Right-handed alpha
Helix 5
5
A
110 124Right-handed alpha
Helix 6
6
A
133 149Right-handed alpha
Helix 7
7
A
162 166Right-handed 310
Helix 8
8
A
167 184Right-handed alpha
Helix 9
9
A
185 190Right-handed alpha
Helix 10
10
A
195 209Right-handed alpha
Helix 11
11
A
238 253Right-handed alpha
Helix 12
12
A
291 301Right-handed alpha
Helix 13
13
A
312 320Right-handed alpha
Helix 14
14
A
321 326Right-handed alpha
Helix 15
15
A
360 372Right-handed alpha
Helix 16
16
B
10 23Right-handed alpha
Helix 17
17
B
24 29Right-handed 310
Helix 18
18
B
58 63Right-handed alpha
Helix 19
19
B
73 87Right-handed alpha
Helix 20
20
B
110 124Right-handed alpha
Helix 21
21
B
133 149Right-handed alpha
Helix 22
22
B
162 166Right-handed 310
Helix 23
23
B
167 184Right-handed alpha
Helix 24
24
B
185 190Right-handed alpha
Helix 25
25
B
195 208Right-handed alpha
Helix 26
26
B
238 252Right-handed alpha
Helix 27
27
B
291 301Right-handed alpha
Helix 28
28
B
312 320Right-handed alpha
Helix 29
29
B
321 326Right-handed alpha
Helix 30
30
B
359 372Right-handed alpha
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There are 4 sheets in PDB entry 3UW3. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 55first strand
Strand 2
A
30 35parallel
Strand 3
A
2 6parallel
Strand 4
A
67 70parallel
Strand 5
A
92 95parallel
Strand 6
A
128 131parallel
Strand 7
A
106 109parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 268first strand
Strand 2
A
152 160parallel
Strand 3
A
277 286anti-parallel
Strand 4
A
345 353anti-parallel
Strand 5
A
331 338anti-parallel
Strand 6
A
306 308parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 55first strand
Strand 2
B
30 35parallel
Strand 3
B
2 6parallel
Strand 4
B
67 70parallel
Strand 5
B
92 95parallel
Strand 6
B
128 131parallel
Strand 7
B
106 109parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
265 268first strand
Strand 2
B
152 160parallel
Strand 3
B
277 286anti-parallel
Strand 4
B
345 353anti-parallel
Strand 5
B
331 338anti-parallel
Strand 6
B
306 308parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il