Analysis of interatomic Contacts of Structural Units in PDB entry:
3UX8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UX8 entry

There is 1 chain in PDB entry 3UX8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2ALA 949
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 3UX8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 42Right-handed alpha
Helix 2
2
A
44 55Right-handed alpha
Helix 3
3
A
97 102Right-handed alpha
Helix 4
4
A
462 471Right-handed alpha
Helix 5
5
A
481 485Right-handed 310
Helix 6
6
A
486 501Right-handed alpha
Helix 7
7
A
518 520Right-handed 310
Helix 8
8
A
521 535Right-handed alpha
Helix 9
9
A
545 552Right-handed alpha
Helix 10
10
A
562 566Right-handed 310
Helix 11
11
A
574 580Right-handed alpha
Helix 12
12
A
584 591Right-handed alpha
Helix 13
13
A
642 648Right-handed alpha
Helix 14
14
A
650 661Right-handed alpha
Helix 15
15
A
674 678Right-handed 310
Helix 16
16
A
696 702Right-handed alpha
Helix 17
17
A
702 713Right-handed alpha
Helix 18
18
A
714 721Right-handed alpha
Helix 19
19
A
723 728Right-handed 310
Helix 20
20
A
768 773Right-handed alpha
Helix 21
21
A
780 786Right-handed alpha
Helix 22
22
A
788 796Right-handed alpha
Helix 23
23
A
799 812Right-handed alpha
Helix 24
24
A
822 826Right-handed 310
Helix 25
25
A
827 842Right-handed alpha
Helix 26
26
A
860 877Right-handed alpha
Helix 27
27
A
887 892Right-handed alpha
Helix 28
28
A
904 908Right-handed 310
Helix 29
29
A
916 922Right-handed alpha
Helix 30
30
A
926 948Right-handed alpha
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There are 4 sheets in PDB entry 3UX8. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 22first strand
Strand 2
A
3 9anti-parallel
Strand 3
A
76 78anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 86first strand
Strand 2
A
507 511parallel
Strand 3
A
538 542parallel
Strand 4
A
26 30parallel
Strand 5
A
554 558parallel
Strand 6
A
569 573anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
623 628first strand
Strand 2
A
609 615anti-parallel
Strand 3
A
671 673anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
680 683first strand
Strand 2
A
848 853parallel
Strand 3
A
880 884parallel
Strand 4
A
632 636parallel
Strand 5
A
896 901parallel
Strand 6
A
910 915anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il