Analysis of interatomic Contacts of Structural Units in PDB entry:
3UXI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3UXI entry

There are 4 chains in PDB entry 3UXI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 5	ARG 417
B	SER 5	ARG 417
C	MET 3	ARG 417
D	MET 3	ARG 417

There are 79 helices in PDB entry 3UXI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	5	16	Right-handed alpha
Helix 2	2	A	20	31	Right-handed alpha
Helix 3	3	A	38	41	Right-handed 310
Helix 4	4	A	69	83	Right-handed alpha
Helix 5	5	A	95	97	Right-handed 310
Helix 6	6	A	105	109	Right-handed 310
Helix 7	7	A	110	113	Right-handed 310
Helix 8	8	A	114	124	Right-handed alpha
Helix 9	9	A	137	141	Right-handed 310
Helix 10	10	A	150	176	Right-handed alpha
Helix 11	11	A	196	211	Right-handed alpha
Helix 12	12	A	240	251	Right-handed alpha
Helix 13	13	A	271	276	Right-handed alpha
Helix 14	14	A	301	314	Right-handed alpha
Helix 15	15	A	332	353	Right-handed alpha
Helix 16	16	A	355	365	Right-handed alpha
Helix 17	17	A	367	378	Right-handed alpha
Helix 18	18	A	382	394	Right-handed alpha
Helix 19	19	A	400	413	Right-handed alpha
Helix 20	20	B	6	16	Right-handed alpha
Helix 21	21	B	20	30	Right-handed alpha
Helix 22	22	B	38	41	Right-handed 310
Helix 23	23	B	69	82	Right-handed alpha
Helix 24	24	B	93	97	Right-handed 310
Helix 25	25	B	105	109	Right-handed 310
Helix 26	26	B	110	113	Right-handed 310
Helix 27	27	B	114	125	Right-handed alpha
Helix 28	28	B	137	141	Right-handed 310
Helix 29	29	B	150	176	Right-handed alpha
Helix 30	30	B	196	211	Right-handed alpha
Helix 31	31	B	240	252	Right-handed alpha
Helix 32	32	B	268	276	Right-handed alpha
Helix 33	33	B	301	314	Right-handed alpha
Helix 34	34	B	332	353	Right-handed alpha
Helix 35	35	B	355	366	Right-handed alpha
Helix 36	36	B	367	378	Right-handed alpha
Helix 37	37	B	382	394	Right-handed alpha
Helix 38	38	B	401	413	Right-handed alpha
Helix 39	39	B	414	417	Right-handed 310
Helix 40	40	C	4	16	Right-handed alpha
Helix 41	41	C	20	30	Right-handed alpha
Helix 42	42	C	38	40	Right-handed 310
Helix 43	43	C	69	84	Right-handed alpha
Helix 44	44	C	95	97	Right-handed 310
Helix 45	45	C	105	109	Right-handed 310
Helix 46	46	C	110	113	Right-handed 310
Helix 47	47	C	114	124	Right-handed alpha
Helix 48	48	C	137	141	Right-handed 310
Helix 49	49	C	150	176	Right-handed alpha
Helix 50	50	C	197	211	Right-handed alpha
Helix 51	51	C	240	252	Right-handed alpha
Helix 52	52	C	271	280	Right-handed alpha
Helix 53	53	C	301	314	Right-handed alpha
Helix 54	54	C	332	353	Right-handed alpha
Helix 55	55	C	355	366	Right-handed alpha
Helix 56	56	C	367	378	Right-handed alpha
Helix 57	57	C	379	381	Right-handed 310
Helix 58	58	C	382	394	Right-handed alpha
Helix 59	59	C	401	413	Right-handed alpha
Helix 60	60	D	4	16	Right-handed alpha
Helix 61	61	D	20	29	Right-handed alpha
Helix 62	62	D	38	41	Right-handed 310
Helix 63	63	D	69	84	Right-handed alpha
Helix 64	64	D	95	97	Right-handed 310
Helix 65	65	D	105	109	Right-handed 310
Helix 66	66	D	110	113	Right-handed 310
Helix 67	67	D	114	124	Right-handed alpha
Helix 68	68	D	137	141	Right-handed 310
Helix 69	69	D	150	176	Right-handed alpha
Helix 70	70	D	196	211	Right-handed alpha
Helix 71	71	D	240	251	Right-handed alpha
Helix 72	72	D	268	280	Right-handed alpha
Helix 73	73	D	301	314	Right-handed alpha
Helix 74	74	D	332	353	Right-handed alpha
Helix 75	75	D	355	366	Right-handed alpha
Helix 76	76	D	367	378	Right-handed alpha
Helix 77	77	D	379	381	Right-handed 310
Helix 78	78	D	382	394	Right-handed alpha
Helix 79	79	D	401	413	Right-handed alpha

There are 11 sheets in PDB entry 3UXI. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	36	first strand
Strand 2	A	89	93	parallel
Strand 3	A	127	131	parallel

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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	179	183	first strand
Strand 2	A	220	225	parallel
Strand 3	A	254	258	parallel
Strand 4	A	282	286	parallel
Strand 5	A	320	324	parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	188	189	first strand
Strand 2	A	236	237	anti-parallel

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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	36	first strand
Strand 2	B	89	91	parallel
Strand 3	B	127	129	parallel

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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	179	183	first strand
Strand 2	B	220	225	parallel
Strand 3	B	254	258	parallel
Strand 4	B	282	286	parallel
Strand 5	B	320	324	parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	188	189	first strand
Strand 2	B	236	237	anti-parallel

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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	34	36	first strand
Strand 2	C	89	93	parallel
Strand 3	C	127	131	parallel

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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	179	183	first strand
Strand 2	C	220	225	parallel
Strand 3	C	254	258	parallel
Strand 4	C	282	286	parallel
Strand 5	C	320	324	parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	188	189	first strand
Strand 2	C	236	237	anti-parallel

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There are 9 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	36	first strand
Strand 2	D	89	93	parallel
Strand 3	D	127	131	parallel
Strand 4	D	179	183	parallel
Strand 5	D	220	225	parallel
Strand 6	D	254	258	parallel
Strand 7	D	282	286	parallel
Strand 8	D	320	324	parallel
Strand 9	D	33	36	parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	188	189	first strand
Strand 2	D	236	237	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3UXI

Analysis of interatomic Contacts of Structural Units in PDB entry:
3UXI