Analysis of interatomic Contacts of Structural Units in PDB entry:
3UXL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UXL entry

There are 4 chains in PDB entry 3UXL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3VAL 359
B
 GLU 3VAL 359
C
 GLU 3VAL 359
D
 GLU 3VAL 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 3UXL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
55 74Right-handed alpha
Helix 2
2
A
79 91Right-handed alpha
Helix 3
3
A
97 119Right-handed alpha
Helix 4
4
A
122 127Right-handed alpha
Helix 5
5
A
143 158Right-handed alpha
Helix 6
6
A
171 187Right-handed alpha
Helix 7
7
A
201 216Right-handed alpha
Helix 8
8
A
228 237Right-handed alpha
Helix 9
9
A
251 261Right-handed alpha
Helix 10
10
A
275 290Right-handed alpha
Helix 11
11
A
299 309Right-handed alpha
Helix 12
12
A
350 355Right-handed alpha
Helix 13
13
B
55 74Right-handed alpha
Helix 14
14
B
79 91Right-handed alpha
Helix 15
15
B
97 119Right-handed alpha
Helix 16
16
B
122 127Right-handed alpha
Helix 17
17
B
144 158Right-handed alpha
Helix 18
18
B
171 187Right-handed alpha
Helix 19
19
B
201 216Right-handed alpha
Helix 20
20
B
228 238Right-handed alpha
Helix 21
21
B
251 261Right-handed alpha
Helix 22
22
B
275 290Right-handed alpha
Helix 23
23
B
299 309Right-handed alpha
Helix 24
24
B
350 355Right-handed alpha
Helix 25
25
C
55 74Right-handed alpha
Helix 26
26
C
79 91Right-handed alpha
Helix 27
27
C
97 119Right-handed alpha
Helix 28
28
C
122 127Right-handed alpha
Helix 29
29
C
143 158Right-handed alpha
Helix 30
30
C
171 187Right-handed alpha
Helix 31
31
C
201 216Right-handed alpha
Helix 32
32
C
228 238Right-handed alpha
Helix 33
33
C
251 261Right-handed alpha
Helix 34
34
C
275 291Right-handed alpha
Helix 35
35
C
299 309Right-handed alpha
Helix 36
36
C
350 358Right-handed alpha
Helix 37
37
D
55 57Right-handed 310
Helix 38
38
D
58 74Right-handed alpha
Helix 39
39
D
79 91Right-handed alpha
Helix 40
40
D
97 119Right-handed alpha
Helix 41
41
D
122 127Right-handed alpha
Helix 42
42
D
143 158Right-handed alpha
Helix 43
43
D
171 187Right-handed alpha
Helix 44
44
D
201 216Right-handed alpha
Helix 45
45
D
228 238Right-handed alpha
Helix 46
46
D
251 261Right-handed alpha
Helix 47
47
D
275 291Right-handed alpha
Helix 48
48
D
299 309Right-handed alpha
Helix 49
49
D
350 355Right-handed alpha
Helix 50
50
D
356 358Right-handed 310
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There are 12 sheets in PDB entry 3UXL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 24first strand
Strand 2
A
27 41anti-parallel
Strand 3
A
46 52anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 267first strand
Strand 2
A
243 245parallel
Strand 3
A
219 221parallel
Strand 4
A
191 195parallel
Strand 5
A
162 166parallel
Strand 6
A
134 139parallel
Strand 7
A
316 318parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 267first strand
Strand 2
A
243 245parallel
Strand 3
A
219 221parallel
Strand 4
A
191 195parallel
Strand 5
A
162 166parallel
Strand 6
A
134 139parallel
Strand 7
A
336 338anti-parallel
Strand 8
A
331 333anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 24first strand
Strand 2
B
27 41anti-parallel
Strand 3
B
46 52anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
266 267first strand
Strand 2
B
243 245parallel
Strand 3
B
219 221parallel
Strand 4
B
191 195parallel
Strand 5
B
162 166parallel
Strand 6
B
134 139parallel
Strand 7
B
316 318parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
266 267first strand
Strand 2
B
243 245parallel
Strand 3
B
219 221parallel
Strand 4
B
191 195parallel
Strand 5
B
162 166parallel
Strand 6
B
134 139parallel
Strand 7
B
336 338anti-parallel
Strand 8
B
331 333anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 24first strand
Strand 2
C
27 41anti-parallel
Strand 3
C
46 52anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
266 267first strand
Strand 2
C
243 245parallel
Strand 3
C
219 221parallel
Strand 4
C
191 195parallel
Strand 5
C
162 166parallel
Strand 6
C
134 139parallel
Strand 7
C
316 318parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
266 267first strand
Strand 2
C
243 245parallel
Strand 3
C
219 221parallel
Strand 4
C
191 195parallel
Strand 5
C
162 166parallel
Strand 6
C
134 139parallel
Strand 7
C
336 338anti-parallel
Strand 8
C
331 333anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 24first strand
Strand 2
D
27 41anti-parallel
Strand 3
D
46 52anti-parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
266 267first strand
Strand 2
D
243 245parallel
Strand 3
D
219 221parallel
Strand 4
D
191 195parallel
Strand 5
D
162 166parallel
Strand 6
D
134 139parallel
Strand 7
D
316 318parallel
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There are 8 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
266 267first strand
Strand 2
D
243 245parallel
Strand 3
D
219 221parallel
Strand 4
D
191 195parallel
Strand 5
D
162 166parallel
Strand 6
D
134 139parallel
Strand 7
D
336 338anti-parallel
Strand 8
D
331 333anti-parallel
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