Analysis of interatomic Contacts of Structural Units in PDB entry:
3UXM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UXM entry

There are 4 chains in PDB entry 3UXM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 3LEU 208
B
 THR 2ARG 207
C
 THR 2LEU 208
D
 GLY 3LEU 205
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 3UXM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 30Right-handed alpha
Helix 2
2
A
43 55Right-handed alpha
Helix 3
3
A
62 81Right-handed alpha
Helix 4
4
A
81 88Right-handed alpha
Helix 5
5
A
97 105Right-handed alpha
Helix 6
6
A
112 125Right-handed alpha
Helix 7
7
A
138 145Right-handed alpha
Helix 8
8
A
159 177Right-handed alpha
Helix 9
9
A
189 208Right-handed alpha
Helix 10
10
B
11 14Right-handed 310
Helix 11
11
B
15 29Right-handed alpha
Helix 12
12
B
43 55Right-handed alpha
Helix 13
13
B
62 81Right-handed alpha
Helix 14
14
B
81 88Right-handed alpha
Helix 15
15
B
97 105Right-handed alpha
Helix 16
16
B
112 125Right-handed alpha
Helix 17
17
B
138 150Right-handed alpha
Helix 18
18
B
153 158Right-handed 310
Helix 19
19
B
159 177Right-handed alpha
Helix 20
20
B
189 207Right-handed alpha
Helix 21
21
C
19 30Right-handed alpha
Helix 22
22
C
43 55Right-handed alpha
Helix 23
23
C
62 81Right-handed alpha
Helix 24
24
C
81 88Right-handed alpha
Helix 25
25
C
97 105Right-handed alpha
Helix 26
26
C
112 125Right-handed alpha
Helix 27
27
C
138 147Right-handed alpha
Helix 28
28
C
159 177Right-handed alpha
Helix 29
29
C
189 208Right-handed alpha
Helix 30
30
D
15 29Right-handed alpha
Helix 31
31
D
43 55Right-handed alpha
Helix 32
32
D
62 81Right-handed alpha
Helix 33
33
D
81 88Right-handed alpha
Helix 34
34
D
97 105Right-handed alpha
Helix 35
35
D
112 125Right-handed alpha
Helix 36
36
D
138 150Right-handed alpha
Helix 37
37
D
153 158Right-handed 310
Helix 38
38
D
159 177Right-handed alpha
Helix 39
39
D
189 205Right-handed alpha
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There are 4 sheets in PDB entry 3UXM. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 38first strand
Strand 2
A
91 95parallel
Strand 3
A
4 9parallel
Strand 4
A
131 136parallel
Strand 5
A
181 185parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 38first strand
Strand 2
B
91 95parallel
Strand 3
B
4 9parallel
Strand 4
B
131 136parallel
Strand 5
B
181 185parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
34 38first strand
Strand 2
C
91 95parallel
Strand 3
C
4 9parallel
Strand 4
C
131 136parallel
Strand 5
C
181 185parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
34 38first strand
Strand 2
D
91 95parallel
Strand 3
D
4 9parallel
Strand 4
D
131 136parallel
Strand 5
D
181 185parallel
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