Analysis of interatomic Contacts of Structural Units in PDB entry:
3UXU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UXU entry

There is 1 chain in PDB entry 3UXU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ILE 176GLY 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 3UXU. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
180 195Right-handed alpha
Helix 2
2
A
195 209Right-handed alpha
Helix 3
3
A
211 221Right-handed alpha
Helix 4
4
A
222 225Right-handed 310
Helix 5
5
A
260 271Right-handed alpha
Helix 6
6
A
276 278Right-handed 310
Helix 7
7
A
279 291Right-handed alpha
Helix 8
8
A
294 302Right-handed alpha
Helix 9
9
A
311 334Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 3UXU.

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
226 227first strand
Strand 2
A
232 238anti-parallel
Strand 3
A
244 250anti-parallel
Strand 4
A
307 308anti-parallel
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il