Analysis of interatomic Contacts of Structural Units in PDB entry:
3UXV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UXV entry

There are 4 chains in PDB entry 3UXV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 29GLN 287
B
 ASN 29GLN 287
C
 ASN 29GLN 287
D
 ASN 29GLN 287
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 3UXV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 36Right-handed 310
Helix 2
2
A
41 46Right-handed alpha
Helix 3
3
A
47 49Right-handed 310
Helix 4
4
A
94 104Right-handed alpha
Helix 5
5
A
112 129Right-handed alpha
Helix 6
6
A
138 143Right-handed 310
Helix 7
7
A
168 173Right-handed 310
Helix 8
8
A
215 225Right-handed alpha
Helix 9
9
A
226 229Right-handed 310
Helix 10
10
A
232 249Right-handed alpha
Helix 11
11
B
32 36Right-handed 310
Helix 12
12
B
41 48Right-handed alpha
Helix 13
13
B
94 104Right-handed alpha
Helix 14
14
B
112 129Right-handed alpha
Helix 15
15
B
138 143Right-handed 310
Helix 16
16
B
168 173Right-handed 310
Helix 17
17
B
215 225Right-handed alpha
Helix 18
18
B
232 249Right-handed alpha
Helix 19
19
C
32 36Right-handed 310
Helix 20
20
C
41 48Right-handed alpha
Helix 21
21
C
94 104Right-handed alpha
Helix 22
22
C
112 129Right-handed alpha
Helix 23
23
C
138 143Right-handed 310
Helix 24
24
C
168 173Right-handed 310
Helix 25
25
C
215 225Right-handed alpha
Helix 26
26
C
232 249Right-handed alpha
Helix 27
27
D
32 36Right-handed 310
Helix 28
28
D
41 46Right-handed alpha
Helix 29
29
D
47 49Right-handed 310
Helix 30
30
D
94 104Right-handed alpha
Helix 31
31
D
112 129Right-handed alpha
Helix 32
32
D
140 143Right-handed 310
Helix 33
33
D
168 173Right-handed 310
Helix 34
34
D
215 225Right-handed alpha
Helix 35
35
D
226 229Right-handed 310
Helix 36
36
D
232 249Right-handed alpha
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There are 8 sheets in PDB entry 3UXV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
91 93anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 137first strand
Strand 2
A
76 86anti-parallel
Strand 3
A
57 70anti-parallel
Strand 4
A
265 272anti-parallel
Strand 5
A
252 259anti-parallel
Strand 6
A
201 214anti-parallel
Strand 7
A
176 192anti-parallel
Strand 8
A
153 154parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 40first strand
Strand 2
B
91 93anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 137first strand
Strand 2
B
76 86anti-parallel
Strand 3
B
57 70anti-parallel
Strand 4
B
265 272anti-parallel
Strand 5
B
252 259anti-parallel
Strand 6
B
200 214anti-parallel
Strand 7
B
176 193anti-parallel
Strand 8
B
153 154parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 40first strand
Strand 2
C
91 93anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
133 137first strand
Strand 2
C
76 86anti-parallel
Strand 3
C
57 70anti-parallel
Strand 4
C
265 272anti-parallel
Strand 5
C
252 259anti-parallel
Strand 6
C
200 214anti-parallel
Strand 7
C
176 193anti-parallel
Strand 8
C
153 154parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
38 40first strand
Strand 2
D
91 93anti-parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
133 138first strand
Strand 2
D
76 86anti-parallel
Strand 3
D
57 70anti-parallel
Strand 4
D
265 272anti-parallel
Strand 5
D
252 259anti-parallel
Strand 6
D
201 214anti-parallel
Strand 7
D
176 192anti-parallel
Strand 8
D
153 154parallel
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