Analysis of interatomic Contacts of Structural Units in PDB entry:
3UYL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UYL entry

There are 2 chains in PDB entry 3UYL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0THR 385
B
 MET 1ASN 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 3UYL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 16Right-handed alpha
Helix 2
2
A
17 27Right-handed alpha
Helix 3
3
A
36 38Right-handed 310
Helix 4
4
A
39 46Right-handed alpha
Helix 5
5
A
72 77Right-handed 310
Helix 6
6
A
80 113Right-handed alpha
Helix 7
7
A
123 133Right-handed alpha
Helix 8
8
A
149 166Right-handed alpha
Helix 9
9
A
182 186Right-handed 310
Helix 10
10
A
208 212Right-handed 310
Helix 11
11
A
225 233Right-handed alpha
Helix 12
12
A
234 247Right-handed alpha
Helix 13
13
A
257 264Right-handed 310
Helix 14
14
A
278 286Right-handed 310
Helix 15
15
A
294 304Right-handed alpha
Helix 16
16
A
316 327Right-handed alpha
Helix 17
17
A
335 340Right-handed alpha
Helix 18
18
A
341 354Right-handed alpha
Helix 19
19
A
356 371Right-handed alpha
Helix 20
20
A
374 385Right-handed alpha
Helix 21
21
B
10 16Right-handed alpha
Helix 22
22
B
17 27Right-handed alpha
Helix 23
23
B
36 46Right-handed alpha
Helix 24
24
B
72 77Right-handed 310
Helix 25
25
B
80 113Right-handed alpha
Helix 26
26
B
123 134Right-handed alpha
Helix 27
27
B
149 166Right-handed alpha
Helix 28
28
B
182 186Right-handed 310
Helix 29
29
B
208 212Right-handed 310
Helix 30
30
B
225 233Right-handed alpha
Helix 31
31
B
234 247Right-handed alpha
Helix 32
32
B
257 264Right-handed 310
Helix 33
33
B
278 286Right-handed 310
Helix 34
34
B
294 304Right-handed alpha
Helix 35
35
B
316 327Right-handed alpha
Helix 36
36
B
335 340Right-handed alpha
Helix 37
37
B
341 355Right-handed alpha
Helix 38
38
B
356 371Right-handed alpha
Helix 39
39
B
374 384Right-handed alpha
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There are 4 sheets in PDB entry 3UYL. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 195first strand
Strand 2
A
176 179parallel
Strand 3
A
137 140parallel
Strand 4
A
116 120parallel
Strand 5
A
2 6parallel
Strand 6
A
30 35parallel
Strand 7
A
49 52parallel
Strand 8
B
205 206parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 206first strand
Strand 2
B
49 52parallel
Strand 3
B
30 35parallel
Strand 4
B
2 6parallel
Strand 5
B
116 120parallel
Strand 6
B
137 140parallel
Strand 7
B
176 179parallel
Strand 8
B
194 195parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 275first strand
Strand 2
A
250 256parallel
Strand 3
A
218 223parallel
Strand 4
A
288 291parallel
Strand 5
A
308 310parallel
Strand 6
A
330 332parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
272 275first strand
Strand 2
B
250 256parallel
Strand 3
B
218 223parallel
Strand 4
B
288 291parallel
Strand 5
B
308 310parallel
Strand 6
B
330 332parallel
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