Analysis of interatomic Contacts of Structural Units in PDB entry:
3UZ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UZ0 entry

There are 4 chains in PDB entry 3UZ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 104SER 217
B
 ASN 78MSE 220
C
 ASP 104PRO 216
D
 ASN 78MSE 220
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 3UZ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
104 129Right-handed alpha
Helix 2
2
A
134 164Right-handed alpha
Helix 3
3
A
189 204Right-handed alpha
Helix 4
4
B
105 107Right-handed 310
Helix 5
5
B
215 220Right-handed 310
Helix 6
6
C
105 129Right-handed alpha
Helix 7
7
C
134 164Right-handed alpha
Helix 8
8
C
189 204Right-handed alpha
Helix 9
9
D
105 107Right-handed 310
Helix 10
10
D
215 220Right-handed 310
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There are 9 sheets in PDB entry 3UZ0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 173first strand
Strand 2
A
179 184anti-parallel
Strand 3
A
210 215parallel
Strand 4
B
115 118anti-parallel
Strand 5
B
109 112anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 93first strand
Strand 2
B
122 126anti-parallel
Strand 3
B
203 209anti-parallel
Strand 4
B
163 170anti-parallel
Strand 5
B
152 158anti-parallel
Strand 6
B
140 148anti-parallel
Strand 7
B
180 181anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 93first strand
Strand 2
B
122 126anti-parallel
Strand 3
B
203 209anti-parallel
Strand 4
B
212 214anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 135first strand
Strand 2
B
186 189anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
169 173first strand
Strand 2
C
178 184anti-parallel
Strand 3
C
209 215parallel
Strand 4
D
115 118anti-parallel
Strand 5
D
109 112anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
89 93first strand
Strand 2
D
122 126anti-parallel
Strand 3
D
203 209anti-parallel
Strand 4
D
163 172anti-parallel
Strand 5
D
152 158anti-parallel
Strand 6
D
147 148anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
212 214first strand
Strand 2
D
203 209anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
163 172first strand
Strand 2
D
185 190anti-parallel
Strand 3
D
133 136anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
152 158first strand
Strand 2
D
140 144anti-parallel
Strand 3
D
180 181anti-parallel
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