Analysis of interatomic Contacts of Structural Units in PDB entry:
3UZE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UZE entry

There are 4 chains in PDB entry 3UZE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2PRO 245
B
 VAL 2LYS 243
C
 TYR 299PHE 397
D
 ALA 300ARG 393
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 3UZE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
29 33Right-handed 310
Helix 2
2
A
63 66Right-handed 310
Helix 3
3
A
88 92Right-handed 310
Helix 4
4
A
215 219Right-handed 310
Helix 5
5
B
29 33Right-handed 310
Helix 6
6
B
63 66Right-handed 310
Helix 7
7
B
88 92Right-handed 310
Helix 8
8
B
215 219Right-handed 310
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There are 18 sheets in PDB entry 3UZE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 7first strand
Strand 2
A
19 26anti-parallel
Strand 3
A
79 84anti-parallel
Strand 4
A
69 74anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 13first strand
Strand 2
A
111 115parallel
Strand 3
A
93 99anti-parallel
Strand 4
A
35 40anti-parallel
Strand 5
A
47 52anti-parallel
Strand 6
A
59 61anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 13first strand
Strand 2
A
111 115parallel
Strand 3
A
93 99anti-parallel
Strand 4
A
106 107anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 139first strand
Strand 2
A
151 157anti-parallel
Strand 3
A
206 211anti-parallel
Strand 4
A
198 203anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 146first strand
Strand 2
A
238 243parallel
Strand 3
A
220 226anti-parallel
Strand 4
A
169 174anti-parallel
Strand 5
A
181 185anti-parallel
Strand 6
A
189 190anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
166 167anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 7first strand
Strand 2
B
19 26anti-parallel
Strand 3
B
79 84anti-parallel
Strand 4
B
69 74anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 13first strand
Strand 2
B
111 115parallel
Strand 3
B
93 99anti-parallel
Strand 4
B
35 40anti-parallel
Strand 5
B
47 52anti-parallel
Strand 6
B
59 61anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 13first strand
Strand 2
B
111 115parallel
Strand 3
B
93 99anti-parallel
Strand 4
B
106 107anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 139first strand
Strand 2
B
151 157anti-parallel
Strand 3
B
206 211anti-parallel
Strand 4
B
198 203anti-parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 145first strand
Strand 2
B
238 242parallel
Strand 3
B
220 226anti-parallel
Strand 4
B
169 174anti-parallel
Strand 5
B
181 185anti-parallel
Strand 6
B
189 190anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 163first strand
Strand 2
B
166 167anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
306 308first strand
Strand 2
C
320 326anti-parallel
Strand 3
C
366 370anti-parallel
Strand 4
C
350 351anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
333 334first strand
Strand 2
C
357 358anti-parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
337 340first strand
Strand 2
C
374 380anti-parallel
Strand 3
C
387 393anti-parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
306 308first strand
Strand 2
D
320 326anti-parallel
Strand 3
D
366 369anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
333 334first strand
Strand 2
D
357 358anti-parallel
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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
337 340first strand
Strand 2
D
374 380anti-parallel
Strand 3
D
387 393anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il