Analysis of interatomic Contacts of Structural Units in PDB entry:
3UZS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UZS entry

There are 4 chains in PDB entry 3UZS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 29PRO 671
B
 SER 2ASN 340
G
 ALA 2PHE 67
C
 G 41 C 68
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 3UZS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 49Right-handed alpha
Helix 2
2
A
54 60Right-handed alpha
Helix 3
3
A
61 75Right-handed alpha
Helix 4
4
A
79 94Right-handed alpha
Helix 5
5
A
100 113Right-handed alpha
Helix 6
6
A
113 119Right-handed alpha
Helix 7
7
A
125 138Right-handed alpha
Helix 8
8
A
142 145Right-handed 310
Helix 9
9
A
146 158Right-handed alpha
Helix 10
10
A
159 167Right-handed alpha
Helix 11
11
A
168 184Right-handed alpha
Helix 12
12
A
224 231Right-handed alpha
Helix 13
13
A
232 247Right-handed alpha
Helix 14
14
A
278 286Right-handed alpha
Helix 15
15
A
290 311Right-handed alpha
Helix 16
16
A
370 384Right-handed alpha
Helix 17
17
A
418 429Right-handed alpha
Helix 18
18
A
444 449Right-handed alpha
Helix 19
19
A
460 464Right-handed 310
Helix 20
20
A
513 524Right-handed alpha
Helix 21
21
A
525 547Right-handed alpha
Helix 22
22
A
636 657Right-handed alpha
Helix 23
23
B
3 26Right-handed alpha
Helix 24
24
B
29 35Right-handed alpha
Helix 25
25
G
3 25Right-handed alpha
Helix 26
26
G
29 45Right-handed alpha
Helix 27
27
G
46 48Right-handed 310
Helix 28
28
G
59 64Right-handed alpha
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There are 12 sheets in PDB entry 3UZS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 200first strand
Strand 2
A
203 209anti-parallel
Strand 3
A
216 223anti-parallel
Strand 4
A
266 272anti-parallel
Strand 5
A
257 263anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 325first strand
Strand 2
A
331 333anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
562 568first strand
Strand 2
A
576 583anti-parallel
Strand 3
A
587 591anti-parallel
Strand 4
A
599 602anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
606 613first strand
Strand 2
A
618 624anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 50first strand
Strand 2
B
337 340anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 63first strand
Strand 2
B
69 74anti-parallel
Strand 3
B
78 83anti-parallel
Strand 4
B
88 94anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 103first strand
Strand 2
B
111 116anti-parallel
Strand 3
B
121 125anti-parallel
Strand 4
B
134 139anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 151first strand
Strand 2
B
156 161anti-parallel
Strand 3
B
165 170anti-parallel
Strand 4
B
175 181anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
187 192first strand
Strand 2
B
198 203anti-parallel
Strand 3
B
207 212anti-parallel
Strand 4
B
217 223anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
233 234first strand
Strand 2
B
240 244anti-parallel
Strand 3
B
250 254anti-parallel
Strand 4
B
259 264anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
273 278first strand
Strand 2
B
284 289anti-parallel
Strand 3
B
295 298anti-parallel
Strand 4
B
304 307anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
315 320first strand
Strand 2
B
327 331anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il