Analysis of interatomic Contacts of Structural Units in PDB entry:
3UZU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3UZU entry

There is 1 chain in PDB entry 3UZU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 14GLY 275
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3UZU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 35Right-handed alpha
Helix 2
2
A
52 61Right-handed alpha
Helix 3
3
A
73 85Right-handed alpha
Helix 4
4
A
94 98Right-handed 310
Helix 5
5
A
99 104Right-handed 310
Helix 6
6
A
119 131Right-handed alpha
Helix 7
7
A
132 135Right-handed 310
Helix 8
8
A
146 153Right-handed alpha
Helix 9
9
A
162 171Right-handed alpha
Helix 10
10
A
181 183Right-handed 310
Helix 11
11
A
202 206Right-handed 310
Helix 12
12
A
210 222Right-handed alpha
Helix 13
13
A
223 225Right-handed 310
Helix 14
14
A
228 233Right-handed alpha
Helix 15
15
A
234 237Right-handed 310
Helix 16
16
A
252 256Right-handed 310
Helix 17
17
A
257 272Right-handed alpha
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There are 2 sheets in PDB entry 3UZU. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 21first strand
Strand 2
A
185 186anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 92first strand
Strand 2
A
67 71parallel
Strand 3
A
41 45parallel
Strand 4
A
112 117parallel
Strand 5
A
137 145parallel
Strand 6
A
193 200anti-parallel
Strand 7
A
172 180anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il