Analysis of interatomic Contacts of Structural Units in PDB entry:
3V00


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3V00 entry

There are 3 chains in PDB entry 3V00 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 HIS -2PHE 350
B
 GLU 9PHE 350
A
 HIS 0PHE 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 3V00. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
18 23Right-handed 310
Helix 2
2
C
41 54Right-handed alpha
Helix 3
3
C
58 63Right-handed alpha
Helix 4
4
C
65 87Right-handed alpha
Helix 5
5
C
95 110Right-handed alpha
Helix 6
6
C
116 129Right-handed alpha
Helix 7
7
C
129 137Right-handed alpha
Helix 8
8
C
138 142Right-handed 310
Helix 9
9
C
147 154Right-handed alpha
Helix 10
10
C
154 160Right-handed alpha
Helix 11
11
C
166 173Right-handed alpha
Helix 12
12
C
206 211Right-handed 310
Helix 13
13
C
224 226Right-handed 310
Helix 14
14
C
237 251Right-handed alpha
Helix 15
15
C
266 277Right-handed alpha
Helix 16
16
C
278 282Right-handed 310
Helix 17
17
C
291 305Right-handed alpha
Helix 18
18
C
324 343Right-handed alpha
Helix 19
19
B
41 53Right-handed alpha
Helix 20
20
B
58 64Right-handed alpha
Helix 21
21
B
65 87Right-handed alpha
Helix 22
22
B
93 110Right-handed alpha
Helix 23
23
B
116 127Right-handed alpha
Helix 24
24
B
129 137Right-handed alpha
Helix 25
25
B
147 154Right-handed alpha
Helix 26
26
B
154 160Right-handed alpha
Helix 27
27
B
166 172Right-handed alpha
Helix 28
28
B
205 211Right-handed 310
Helix 29
29
B
224 228Right-handed 310
Helix 30
30
B
237 252Right-handed alpha
Helix 31
31
B
266 274Right-handed alpha
Helix 32
32
B
278 282Right-handed 310
Helix 33
33
B
291 305Right-handed alpha
Helix 34
34
B
324 342Right-handed alpha
Helix 35
35
A
10 24Right-handed alpha
Helix 36
36
A
25 27Right-handed 310
Helix 37
37
A
41 54Right-handed alpha
Helix 38
38
A
58 64Right-handed alpha
Helix 39
39
A
65 85Right-handed alpha
Helix 40
40
A
93 97Right-handed 310
Helix 41
41
A
98 110Right-handed alpha
Helix 42
42
A
116 127Right-handed alpha
Helix 43
43
A
129 138Right-handed alpha
Helix 44
44
A
139 142Right-handed 310
Helix 45
45
A
146 152Right-handed alpha
Helix 46
46
A
154 160Right-handed alpha
Helix 47
47
A
166 172Right-handed alpha
Helix 48
48
A
207 211Right-handed 310
Helix 49
49
A
224 226Right-handed 310
Helix 50
50
A
237 252Right-handed alpha
Helix 51
51
A
253 256Right-handed 310
Helix 52
52
A
266 277Right-handed alpha
Helix 53
53
A
278 282Right-handed 310
Helix 54
54
A
291 305Right-handed alpha
Helix 55
55
A
324 343Right-handed alpha
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There are 3 sheets in PDB entry 3V00. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
180 186first strand
Strand 2
C
191 197anti-parallel
Strand 3
C
29 36parallel
Strand 4
C
214 222parallel
Strand 5
C
259 265parallel
Strand 6
C
315 319parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
180 187first strand
Strand 2
B
190 197anti-parallel
Strand 3
B
30 36parallel
Strand 4
B
214 222parallel
Strand 5
B
259 265parallel
Strand 6
B
315 319parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 187first strand
Strand 2
A
190 197anti-parallel
Strand 3
A
29 36parallel
Strand 4
A
214 222parallel
Strand 5
A
259 265parallel
Strand 6
A
316 319parallel
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