Analysis of interatomic Contacts of Structural Units in PDB entry:
3V2H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3V2H entry

There are 2 chains in PDB entry 3V2H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -1GLN 258
B
 SER -1GLN 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3V2H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 25Right-handed alpha
Helix 2
2
A
36 49Right-handed alpha
Helix 3
3
A
64 79Right-handed alpha
Helix 4
4
A
96 100Right-handed 310
Helix 5
5
A
101 113Right-handed alpha
Helix 6
6
A
113 131Right-handed alpha
Helix 7
7
A
140 144Right-handed 310
Helix 8
8
A
150 172Right-handed alpha
Helix 9
9
A
225 238Right-handed alpha
Helix 10
10
A
239 244Right-handed 310
Helix 11
11
A
254 258Right-handed 310
Helix 12
12
B
12 25Right-handed alpha
Helix 13
13
B
36 49Right-handed alpha
Helix 14
14
B
64 80Right-handed alpha
Helix 15
15
B
96 100Right-handed 310
Helix 16
16
B
101 113Right-handed alpha
Helix 17
17
B
113 131Right-handed alpha
Helix 18
18
B
140 144Right-handed 310
Helix 19
19
B
150 171Right-handed alpha
Helix 20
20
B
172 174Right-handed 310
Helix 21
21
B
225 238Right-handed alpha
Helix 22
22
B
239 244Right-handed 310
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There are 2 sheets in PDB entry 3V2H. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 58first strand
Strand 2
A
28 32parallel
Strand 3
A
4 8parallel
Strand 4
A
84 87parallel
Strand 5
A
133 138parallel
Strand 6
A
176 183parallel
Strand 7
A
248 251parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 58first strand
Strand 2
B
28 32parallel
Strand 3
B
4 8parallel
Strand 4
B
84 87parallel
Strand 5
B
133 138parallel
Strand 6
B
176 183parallel
Strand 7
B
248 251parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il