Analysis of interatomic Contacts of Structural Units in PDB entry:
3V3E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3V3E entry

There are 2 chains in PDB entry 3V3E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 PRO 30PHE 267
A
 PRO 30PHE 267
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3V3E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
31 44Right-handed alpha
Helix 2
2
B
47 51Right-handed 310
Helix 3
3
B
68 82Right-handed alpha
Helix 4
4
B
82 92Right-handed alpha
Helix 5
5
B
95 99Right-handed 310
Helix 6
6
B
100 124Right-handed alpha
Helix 7
7
B
125 128Right-handed 310
Helix 8
8
B
141 149Right-handed alpha
Helix 9
9
B
150 165Right-handed alpha
Helix 10
10
B
168 181Right-handed alpha
Helix 11
11
B
189 213Right-handed alpha
Helix 12
12
B
219 226Right-handed alpha
Helix 13
13
B
226 249Right-handed alpha
Helix 14
14
B
254 265Right-handed alpha
Helix 15
15
A
31 44Right-handed alpha
Helix 16
16
A
68 92Right-handed alpha
Helix 17
17
A
95 99Right-handed 310
Helix 18
18
A
100 124Right-handed alpha
Helix 19
19
A
125 128Right-handed 310
Helix 20
20
A
141 149Right-handed alpha
Helix 21
21
A
150 164Right-handed alpha
Helix 22
22
A
168 181Right-handed alpha
Helix 23
23
A
189 213Right-handed alpha
Helix 24
24
A
219 226Right-handed alpha
Helix 25
25
A
227 249Right-handed alpha
Helix 26
26
A
254 265Right-handed alpha
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There are 2 sheets in PDB entry 3V3E. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 132first strand
Strand 2
B
138 140anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 132first strand
Strand 2
A
138 140anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il