Analysis of interatomic Contacts of Structural Units in PDB entry:
3V44


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3V44 entry

There is 1 chain in PDB entry 3V44 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 24ARG 424
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 3V44. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
134 139Right-handed alpha
Helix 2
2
A
164 170Right-handed 310
Helix 3
3
A
191 195Right-handed 310
Helix 4
4
A
218 223Right-handed alpha
Helix 5
5
A
242 253Right-handed alpha
Helix 6
6
A
286 292Right-handed 310
Helix 7
7
A
383 393Right-handed alpha
Helix 8
8
A
409 413Right-handed 310
Helix 9
9
A
418 422Right-handed 310
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There are 3 sheets in PDB entry 3V44. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 15 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 28first strand
Strand 2
A
31 33anti-parallel
Strand 3
A
51 53parallel
Strand 4
A
75 77parallel
Strand 5
A
100 102parallel
Strand 6
A
124 126parallel
Strand 7
A
150 152parallel
Strand 8
A
175 177parallel
Strand 9
A
198 203parallel
Strand 10
A
230 235parallel
Strand 11
A
258 262parallel
Strand 12
A
296 298parallel
Strand 13
A
320 322parallel
Strand 14
A
344 346parallel
Strand 15
A
368 370parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 62first strand
Strand 2
A
86 87parallel
Strand 3
A
110 111parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 307first strand
Strand 2
A
330 331parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il