Analysis of interatomic Contacts of Structural Units in PDB entry:
3V46


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3V46 entry

There is 1 chain in PDB entry 3V46 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 234ARG 393
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 3V46. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
254 262Right-handed alpha
Helix 2
2
A
266 270Right-handed 310
Helix 3
3
A
304 309Right-handed 310
Helix 4
4
A
319 324Right-handed 310
Helix 5
5
A
330 338Right-handed alpha
Helix 6
6
A
351 357Right-handed alpha
Helix 7
7
A
371 390Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3V46.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 282first strand
Strand 2
A
291 296anti-parallel
Strand 3
A
239 241parallel
Strand 4
A
311 315parallel
Strand 5
A
339 345parallel
Strand 6
A
359 364parallel
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