Analysis of interatomic Contacts of Structural Units in PDB entry:
3V48


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3V48 entry

There are 2 chains in PDB entry 3V48 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1LEU 266
B
 HIS 0ARG 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 3V48. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 28Right-handed 310
Helix 2
2
A
29 38Right-handed alpha
Helix 3
3
A
62 77Right-handed alpha
Helix 4
4
A
88 101Right-handed alpha
Helix 5
5
A
118 149Right-handed alpha
Helix 6
6
A
150 156Right-handed alpha
Helix 7
7
A
157 171Right-handed alpha
Helix 8
8
A
174 188Right-handed alpha
Helix 9
9
A
193 197Right-handed 310
Helix 10
10
A
214 224Right-handed alpha
Helix 11
11
A
238 243Right-handed alpha
Helix 12
12
A
243 266Right-handed alpha
Helix 13
13
B
25 28Right-handed 310
Helix 14
14
B
29 38Right-handed alpha
Helix 15
15
B
62 77Right-handed alpha
Helix 16
16
B
88 101Right-handed alpha
Helix 17
17
B
118 144Right-handed alpha
Helix 18
18
B
145 148Right-handed 310
Helix 19
19
B
150 156Right-handed alpha
Helix 20
20
B
157 171Right-handed alpha
Helix 21
21
B
174 188Right-handed alpha
Helix 22
22
B
193 197Right-handed 310
Helix 23
23
B
214 224Right-handed alpha
Helix 24
24
B
238 243Right-handed alpha
Helix 25
25
B
243 261Right-handed alpha
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There are 2 sheets in PDB entry 3V48. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
41 44anti-parallel
Strand 3
A
15 19parallel
Strand 4
A
82 87parallel
Strand 5
A
105 111parallel
Strand 6
A
201 206parallel
Strand 7
A
227 232parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 5first strand
Strand 2
B
41 44anti-parallel
Strand 3
B
15 19parallel
Strand 4
B
82 87parallel
Strand 5
B
105 111parallel
Strand 6
B
201 206parallel
Strand 7
B
227 232parallel
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