Analysis of interatomic Contacts of Structural Units in PDB entry:
3V64

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3V64 entry

There are 4 chains in PDB entry 3V64 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	TYR 404	GLY 744
A	ALA 1758	PRO 1948
B	LEU 1759	PRO 1948
D	TYR 404	PHE 742

There are 8 helices in PDB entry 3V64. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	C	691	695	Right-handed 310
Helix 2	2	C	704	709	Right-handed 310
Helix 3	3	C	740	742	Right-handed 310
Helix 4	4	A	1778	1783	Right-handed alpha
Helix 5	5	A	1909	1913	Right-handed 310
Helix 6	6	B	1778	1783	Right-handed alpha
Helix 7	7	B	1909	1914	Right-handed 310
Helix 8	8	D	691	695	Right-handed 310

There are 26 sheets in PDB entry 3V64. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	408	409	first strand
Strand 2	C	418	419	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	424	426	first strand
Strand 2	C	433	435	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	460	464	first strand
Strand 2	C	450	453	anti-parallel
Strand 3	C	441	445	anti-parallel
Strand 4	C	687	690	anti-parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	470	476	first strand
Strand 2	C	481	486	anti-parallel
Strand 3	C	491	496	anti-parallel
Strand 4	C	503	506	anti-parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	515	519	first strand
Strand 2	C	524	529	anti-parallel
Strand 3	C	534	539	anti-parallel
Strand 4	C	546	549	anti-parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	556	562	first strand
Strand 2	C	567	572	anti-parallel
Strand 3	C	578	583	anti-parallel
Strand 4	C	590	591	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	600	606	first strand
Strand 2	C	611	616	anti-parallel
Strand 3	C	621	626	anti-parallel
Strand 4	C	633	636	anti-parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	643	649	first strand
Strand 2	C	652	657	anti-parallel
Strand 3	C	662	667	anti-parallel
Strand 4	C	675	678	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	712	714	first strand
Strand 2	C	721	723	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	728	731	first strand
Strand 2	C	735	738	anti-parallel

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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1761	1765	first strand
Strand 2	A	1917	1925	anti-parallel
Strand 3	A	1793	1801	anti-parallel
Strand 4	A	1856	1863	anti-parallel
Strand 5	A	1866	1871	anti-parallel
Strand 6	A	1877	1880	anti-parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1761	1765	first strand
Strand 2	A	1917	1925	anti-parallel
Strand 3	A	1928	1929	anti-parallel

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There are 6 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1770	1773	first strand
Strand 2	A	1893	1896	anti-parallel
Strand 3	A	1807	1812	anti-parallel
Strand 4	A	1821	1827	anti-parallel
Strand 5	A	1830	1836	anti-parallel
Strand 6	A	1842	1849	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1789	1791	first strand
Strand 2	A	1888	1890	anti-parallel

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There are 6 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1761	1765	first strand
Strand 2	B	1917	1925	anti-parallel
Strand 3	B	1793	1801	anti-parallel
Strand 4	B	1856	1863	anti-parallel
Strand 5	B	1866	1871	anti-parallel
Strand 6	B	1877	1880	anti-parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1761	1765	first strand
Strand 2	B	1917	1925	anti-parallel
Strand 3	B	1928	1929	anti-parallel

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There are 6 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1770	1772	first strand
Strand 2	B	1894	1896	anti-parallel
Strand 3	B	1807	1813	anti-parallel
Strand 4	B	1821	1827	anti-parallel
Strand 5	B	1830	1836	anti-parallel
Strand 6	B	1841	1849	anti-parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	424	426	first strand
Strand 2	D	433	435	anti-parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	461	464	first strand
Strand 2	D	450	453	anti-parallel
Strand 3	D	441	445	anti-parallel
Strand 4	D	687	690	anti-parallel

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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	470	476	first strand
Strand 2	D	481	486	anti-parallel
Strand 3	D	491	496	anti-parallel
Strand 4	D	503	506	anti-parallel

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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	513	519	first strand
Strand 2	D	524	529	anti-parallel
Strand 3	D	534	539	anti-parallel
Strand 4	D	546	549	anti-parallel

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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	556	562	first strand
Strand 2	D	567	572	anti-parallel
Strand 3	D	578	583	anti-parallel
Strand 4	D	590	593	anti-parallel

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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	600	606	first strand
Strand 2	D	611	616	anti-parallel
Strand 3	D	621	625	anti-parallel
Strand 4	D	633	636	anti-parallel

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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	643	649	first strand
Strand 2	D	652	657	anti-parallel
Strand 3	D	662	667	anti-parallel
Strand 4	D	675	678	anti-parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	712	716	first strand
Strand 2	D	719	723	anti-parallel

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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	728	731	first strand
Strand 2	D	735	738	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3V64

Analysis of interatomic Contacts of Structural Units in PDB entry:
3V64