Analysis of interatomic Contacts of Structural Units in PDB entry:
3V76


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3V76 entry

There is 1 chain in PDB entry 3V76 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 6VAL 417
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3V76. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 27Right-handed alpha
Helix 2
2
A
41 47Right-handed alpha
Helix 3
3
A
48 51Right-handed 310
Helix 4
4
A
60 62Right-handed 310
Helix 5
5
A
72 79Right-handed alpha
Helix 6
6
A
80 91Right-handed alpha
Helix 7
7
A
108 124Right-handed alpha
Helix 8
8
A
166 170Right-handed 310
Helix 9
9
A
173 182Right-handed alpha
Helix 10
10
A
199 206Right-handed alpha
Helix 11
11
A
207 210Right-handed 310
Helix 12
12
A
238 245Right-handed alpha
Helix 13
13
A
263 275Right-handed alpha
Helix 14
14
A
279 285Right-handed alpha
Helix 15
15
A
289 300Right-handed alpha
Helix 16
16
A
306 310Right-handed 310
Helix 17
17
A
311 324Right-handed alpha
Helix 18
18
A
347 350Right-handed 310
Helix 19
19
A
367 370Right-handed 310
Helix 20
20
A
378 417Right-handed alpha
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There are 6 sheets in PDB entry 3V76. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 128first strand
Strand 2
A
31 34parallel
Strand 3
A
8 11parallel
Strand 4
A
156 159parallel
Strand 5
A
363 365parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 56first strand
Strand 2
A
102 105anti-parallel
Strand 3
A
95 97anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 66first strand
Strand 2
A
372 374anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 139first strand
Strand 2
A
142 147anti-parallel
Strand 3
A
150 154anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 192first strand
Strand 2
A
340 345anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 327first strand
Strand 2
A
254 258anti-parallel
Strand 3
A
213 220anti-parallel
Strand 4
A
223 231anti-parallel
Strand 5
A
235 237anti-parallel
Strand 6
A
196 197anti-parallel
Strand 7
A
331 332anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il