Analysis of interatomic Contacts of Structural Units in PDB entry:
3V7I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3V7I entry

There is 1 chain in PDB entry 3V7I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0LEU 389
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3V7I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 30Right-handed alpha
Helix 2
2
A
35 37Right-handed 310
Helix 3
3
A
38 47Right-handed alpha
Helix 4
4
A
56 62Right-handed alpha
Helix 5
5
A
69 76Right-handed alpha
Helix 6
6
A
84 95Right-handed alpha
Helix 7
7
A
101 129Right-handed alpha
Helix 8
8
A
131 135Right-handed 310
Helix 9
9
A
150 159Right-handed alpha
Helix 10
10
A
173 175Right-handed 310
Helix 11
11
A
176 192Right-handed alpha
Helix 12
12
A
204 209Right-handed 310
Helix 13
13
A
217 225Right-handed alpha
Helix 14
14
A
277 297Right-handed alpha
Helix 15
15
A
315 326Right-handed alpha
Helix 16
16
A
335 343Right-handed alpha
Helix 17
17
A
347 349Right-handed 310
Helix 18
18
A
350 363Right-handed alpha
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There are 4 sheets in PDB entry 3V7I. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 12first strand
Strand 2
A
228 235anti-parallel
Strand 3
A
196 203anti-parallel
Strand 4
A
137 141parallel
Strand 5
A
166 170parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 12first strand
Strand 2
A
228 235anti-parallel
Strand 3
A
3 6anti-parallel
Strand 4
A
242 253anti-parallel
Strand 5
A
380 388anti-parallel
Strand 6
A
369 376anti-parallel
Strand 7
A
308 312parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 18first strand
Strand 2
A
50 53anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 266first strand
Strand 2
A
269 274anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il