Analysis of interatomic Contacts of Structural Units in PDB entry:
3V7R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3V7R entry

There is 1 chain in PDB entry 3V7R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2PHE 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3V7R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 16Right-handed alpha
Helix 2
2
A
21 29Right-handed alpha
Helix 3
3
A
32 46Right-handed alpha
Helix 4
4
A
68 78Right-handed alpha
Helix 5
5
A
93 102Right-handed alpha
Helix 6
6
A
121 125Right-handed 310
Helix 7
7
A
146 148Right-handed 310
Helix 8
8
A
149 167Right-handed alpha
Helix 9
9
A
216 220Right-handed 310
Helix 10
10
A
224 228Right-handed 310
Helix 11
11
A
231 235Right-handed 310
Helix 12
12
A
240 262Right-handed alpha
Helix 13
13
A
263 266Right-handed 310
Helix 14
14
A
267 275Right-handed alpha
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There are 3 sheets in PDB entry 3V7R. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 53first strand
Strand 2
A
57 62anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 91first strand
Strand 2
A
109 116parallel
Strand 3
A
134 141anti-parallel
Strand 4
A
201 212anti-parallel
Strand 5
A
186 198anti-parallel
Strand 6
A
180 183anti-parallel
Strand 7
A
173 176anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 316first strand
Strand 2
A
304 308anti-parallel
Strand 3
A
289 298anti-parallel
Strand 4
A
282 286anti-parallel
Strand 5
A
320 322anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il