Analysis of interatomic Contacts of Structural Units in PDB entry:
3V7T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3V7T entry

There are 4 chains in PDB entry 3V7T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 16PRO 257
B
 ILE 16PRO 257
C
 ILE 16PRO 257
D
 ILE 16PRO 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3V7T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
67 69Right-handed 310
Helix 2
2
A
169 179Right-handed alpha
Helix 3
3
A
248 256Right-handed alpha
Helix 4
4
B
57 62Right-handed alpha
Helix 5
5
B
67 69Right-handed 310
Helix 6
6
B
169 179Right-handed alpha
Helix 7
7
B
248 254Right-handed alpha
Helix 8
8
C
67 69Right-handed 310
Helix 9
9
C
169 179Right-handed alpha
Helix 10
10
C
248 256Right-handed alpha
Helix 11
11
D
57 62Right-handed alpha
Helix 12
12
D
67 69Right-handed 310
Helix 13
13
D
169 178Right-handed alpha
Helix 14
14
D
248 254Right-handed alpha
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There are 8 sheets in PDB entry 3V7T. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 21first strand
Strand 2
A
161 164anti-parallel
Strand 3
A
140 144anti-parallel
Strand 4
A
212 217anti-parallel
Strand 5
A
220 229anti-parallel
Strand 6
A
240 244anti-parallel
Strand 7
A
194 197anti-parallel
Strand 8
A
167 168anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 36first strand
Strand 2
A
40 50anti-parallel
Strand 3
A
53 56anti-parallel
Strand 4
A
108 112anti-parallel
Strand 5
A
87 94anti-parallel
Strand 6
A
71 74anti-parallel
Strand 7
A
30 36anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 21first strand
Strand 2
B
161 164anti-parallel
Strand 3
B
140 144anti-parallel
Strand 4
B
212 217anti-parallel
Strand 5
B
220 229anti-parallel
Strand 6
B
240 244anti-parallel
Strand 7
B
194 197anti-parallel
Strand 8
B
167 168anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 35first strand
Strand 2
B
41 50anti-parallel
Strand 3
B
53 56anti-parallel
Strand 4
B
108 112anti-parallel
Strand 5
B
87 94anti-parallel
Strand 6
B
71 74anti-parallel
Strand 7
B
30 35anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
20 21first strand
Strand 2
C
161 168anti-parallel
Strand 3
C
194 197anti-parallel
Strand 4
C
240 244anti-parallel
Strand 5
C
220 229anti-parallel
Strand 6
C
212 217anti-parallel
Strand 7
C
139 144anti-parallel
Strand 8
C
161 168anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 36first strand
Strand 2
C
40 50anti-parallel
Strand 3
C
53 56anti-parallel
Strand 4
C
108 112anti-parallel
Strand 5
C
87 94anti-parallel
Strand 6
C
71 74anti-parallel
Strand 7
C
30 36anti-parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
20 21first strand
Strand 2
D
161 164anti-parallel
Strand 3
D
140 144anti-parallel
Strand 4
D
212 217anti-parallel
Strand 5
D
220 229anti-parallel
Strand 6
D
240 244anti-parallel
Strand 7
D
194 197anti-parallel
Strand 8
D
167 168anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 36first strand
Strand 2
D
40 50anti-parallel
Strand 3
D
53 56anti-parallel
Strand 4
D
108 112anti-parallel
Strand 5
D
87 94anti-parallel
Strand 6
D
71 74anti-parallel
Strand 7
D
30 36anti-parallel
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