Analysis of interatomic Contacts of Structural Units in PDB entry:
3V9B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3V9B entry

There are 4 chains in PDB entry 3V9B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 82GLN 412
B
 THR 86GLN 412
C
 GLN 88GLN 412
D
 GLU 87GLN 412
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 89 helices in PDB entry 3V9B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
86 96Right-handed alpha
Helix 2
2
A
97 99Right-handed 310
Helix 3
3
A
105 113Right-handed alpha
Helix 4
4
A
116 129Right-handed alpha
Helix 5
5
A
130 135Right-handed alpha
Helix 6
6
A
138 152Right-handed alpha
Helix 7
7
A
161 177Right-handed alpha
Helix 8
8
A
178 182Right-handed 310
Helix 9
9
A
186 200Right-handed alpha
Helix 10
10
A
208 215Right-handed alpha
Helix 11
11
A
217 223Right-handed alpha
Helix 12
12
A
227 240Right-handed alpha
Helix 13
13
A
241 243Right-handed 310
Helix 14
14
A
253 270Right-handed alpha
Helix 15
15
A
271 274Right-handed 310
Helix 16
16
A
275 289Right-handed alpha
Helix 17
17
A
302 319Right-handed alpha
Helix 18
18
A
320 324Right-handed 310
Helix 19
19
A
325 350Right-handed alpha
Helix 20
20
A
355 359Right-handed 310
Helix 21
21
A
364 376Right-handed alpha
Helix 22
22
A
376 388Right-handed alpha
Helix 23
23
A
392 410Right-handed alpha
Helix 24
24
B
87 96Right-handed alpha
Helix 25
25
B
97 99Right-handed 310
Helix 26
26
B
105 113Right-handed alpha
Helix 27
27
B
116 129Right-handed alpha
Helix 28
28
B
130 136Right-handed alpha
Helix 29
29
B
138 152Right-handed alpha
Helix 30
30
B
161 177Right-handed alpha
Helix 31
31
B
178 182Right-handed 310
Helix 32
32
B
186 200Right-handed alpha
Helix 33
33
B
208 215Right-handed alpha
Helix 34
34
B
217 223Right-handed alpha
Helix 35
35
B
227 240Right-handed alpha
Helix 36
36
B
241 243Right-handed 310
Helix 37
37
B
253 270Right-handed alpha
Helix 38
38
B
271 274Right-handed 310
Helix 39
39
B
275 289Right-handed alpha
Helix 40
40
B
302 319Right-handed alpha
Helix 41
41
B
320 324Right-handed 310
Helix 42
42
B
325 350Right-handed alpha
Helix 43
43
B
355 359Right-handed 310
Helix 44
44
B
364 376Right-handed alpha
Helix 45
45
B
376 388Right-handed alpha
Helix 46
46
B
392 409Right-handed alpha
Helix 47
47
C
89 97Right-handed alpha
Helix 48
48
C
105 113Right-handed alpha
Helix 49
49
C
116 129Right-handed alpha
Helix 50
50
C
130 135Right-handed alpha
Helix 51
51
C
138 152Right-handed alpha
Helix 52
52
C
161 177Right-handed alpha
Helix 53
53
C
178 182Right-handed 310
Helix 54
54
C
186 200Right-handed alpha
Helix 55
55
C
208 215Right-handed alpha
Helix 56
56
C
217 223Right-handed alpha
Helix 57
57
C
227 240Right-handed alpha
Helix 58
58
C
241 243Right-handed 310
Helix 59
59
C
253 270Right-handed alpha
Helix 60
60
C
271 274Right-handed 310
Helix 61
61
C
275 289Right-handed alpha
Helix 62
62
C
302 319Right-handed alpha
Helix 63
63
C
320 324Right-handed 310
Helix 64
64
C
325 350Right-handed alpha
Helix 65
65
C
364 376Right-handed alpha
Helix 66
66
C
376 388Right-handed alpha
Helix 67
67
C
392 408Right-handed alpha
Helix 68
68
D
88 96Right-handed alpha
Helix 69
69
D
97 99Right-handed 310
Helix 70
70
D
105 113Right-handed alpha
Helix 71
71
D
116 129Right-handed alpha
Helix 72
72
D
130 135Right-handed alpha
Helix 73
73
D
138 152Right-handed alpha
Helix 74
74
D
161 177Right-handed alpha
Helix 75
75
D
178 182Right-handed 310
Helix 76
76
D
186 200Right-handed alpha
Helix 77
77
D
208 215Right-handed alpha
Helix 78
78
D
217 223Right-handed alpha
Helix 79
79
D
227 240Right-handed alpha
Helix 80
80
D
241 243Right-handed 310
Helix 81
81
D
253 270Right-handed alpha
Helix 82
82
D
271 274Right-handed 310
Helix 83
83
D
275 289Right-handed alpha
Helix 84
84
D
302 319Right-handed alpha
Helix 85
85
D
320 324Right-handed 310
Helix 86
86
D
325 350Right-handed alpha
Helix 87
87
D
364 376Right-handed alpha
Helix 88
88
D
376 388Right-handed alpha
Helix 89
89
D
392 408Right-handed alpha
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There are no sheets in PDB entry 3V9B
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