Analysis of interatomic Contacts of Structural Units in PDB entry:
3VC7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VC7 entry

There are 2 chains in PDB entry 3VC7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4THR 252
B
 GLY 2THR 251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3VC7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 30Right-handed alpha
Helix 2
2
A
40 52Right-handed alpha
Helix 3
3
A
64 79Right-handed alpha
Helix 4
4
A
96 100Right-handed 310
Helix 5
5
A
101 113Right-handed alpha
Helix 6
6
A
113 124Right-handed alpha
Helix 7
7
A
138 142Right-handed 310
Helix 8
8
A
148 169Right-handed alpha
Helix 9
9
A
170 173Right-handed 310
Helix 10
10
A
200 210Right-handed alpha
Helix 11
11
A
217 231Right-handed alpha
Helix 12
12
B
16 29Right-handed alpha
Helix 13
13
B
39 51Right-handed alpha
Helix 14
14
B
63 78Right-handed alpha
Helix 15
15
B
95 99Right-handed 310
Helix 16
16
B
100 112Right-handed alpha
Helix 17
17
B
112 123Right-handed alpha
Helix 18
18
B
137 141Right-handed 310
Helix 19
19
B
147 168Right-handed alpha
Helix 20
20
B
169 172Right-handed 310
Helix 21
21
B
199 209Right-handed alpha
Helix 22
22
B
216 230Right-handed alpha
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There are 2 sheets in PDB entry 3VC7. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 59first strand
Strand 2
A
33 38parallel
Strand 3
A
9 13parallel
Strand 4
A
82 87parallel
Strand 5
A
127 136parallel
Strand 6
A
175 181parallel
Strand 7
A
239 242parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 58first strand
Strand 2
B
32 37parallel
Strand 3
B
8 12parallel
Strand 4
B
81 86parallel
Strand 5
B
126 135parallel
Strand 6
B
174 180parallel
Strand 7
B
237 241parallel
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