Analysis of interatomic Contacts of Structural Units in PDB entry:
3VE7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VE7 entry

There are 2 chains in PDB entry 3VE7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 206
B
 MET 1SER 205
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3VE7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 21Right-handed alpha
Helix 2
2
A
31 38Right-handed alpha
Helix 3
3
A
38 48Right-handed alpha
Helix 4
4
A
62 74Right-handed alpha
Helix 5
5
A
85 87Right-handed 310
Helix 6
6
A
92 97Right-handed alpha
Helix 7
7
A
113 115Right-handed 310
Helix 8
8
A
116 128Right-handed alpha
Helix 9
9
A
138 149Right-handed alpha
Helix 10
10
A
167 172Right-handed alpha
Helix 11
11
A
180 185Right-handed alpha
Helix 12
12
A
188 205Right-handed alpha
Helix 13
13
B
13 21Right-handed alpha
Helix 14
14
B
31 38Right-handed alpha
Helix 15
15
B
38 47Right-handed alpha
Helix 16
16
B
62 71Right-handed alpha
Helix 17
17
B
85 87Right-handed 310
Helix 18
18
B
91 97Right-handed alpha
Helix 19
19
B
113 115Right-handed 310
Helix 20
20
B
116 128Right-handed alpha
Helix 21
21
B
139 149Right-handed alpha
Helix 22
22
B
167 172Right-handed alpha
Helix 23
23
B
180 185Right-handed alpha
Helix 24
24
B
188 205Right-handed alpha
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There are 2 sheets in PDB entry 3VE7. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 7first strand
Strand 2
A
26 30parallel
Strand 3
A
52 59parallel
Strand 4
A
79 83parallel
Strand 5
A
100 104parallel
Strand 6
A
131 133parallel
Strand 7
A
153 156parallel
Strand 8
A
176 179parallel
Strand 9
A
4 7parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 7first strand
Strand 2
B
26 30parallel
Strand 3
B
52 59parallel
Strand 4
B
79 83parallel
Strand 5
B
100 104parallel
Strand 6
B
131 133parallel
Strand 7
B
153 156parallel
Strand 8
B
176 179parallel
Strand 9
B
4 7parallel
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