Analysis of interatomic Contacts of Structural Units in PDB entry:
3VEB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VEB entry

There are 4 chains in PDB entry 3VEB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MET 14GLU 163
N
 T 1 G 16
M
 A 1 G 16
A
 LYS 15LEU 160
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3VEB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
19 37Right-handed alpha
Helix 2
2
B
46 59Right-handed alpha
Helix 3
3
B
63 74Right-handed alpha
Helix 4
4
B
79 96Right-handed alpha
Helix 5
5
B
110 123Right-handed alpha
Helix 6
6
B
127 141Right-handed alpha
Helix 7
7
B
146 160Right-handed alpha
Helix 8
8
A
19 36Right-handed alpha
Helix 9
9
A
46 59Right-handed alpha
Helix 10
10
A
64 75Right-handed alpha
Helix 11
11
A
76 97Right-handed alpha
Helix 12
12
A
98 103Right-handed 310
Helix 13
13
A
111 125Right-handed alpha
Helix 14
14
A
127 159Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3VEB.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
104 106first strand
Strand 2
A
108 110anti-parallel
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