Analysis of interatomic Contacts of Structural Units in PDB entry:
3VEH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VEH entry

There are 4 chains in PDB entry 3VEH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 15ARG 449
B
GLY -1ARG 449
C
SER 15ARG 449
D
ALA 10ARG 449
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 56 helices in PDB entry 3VEH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
25 42Right-handed alpha
Helix 2
2
A
87 103Right-handed alpha
Helix 3
3
A
112 120Right-handed 310
Helix 4
4
A
121 125Right-handed 310
Helix 5
5
A
154 168Right-handed alpha
Helix 6
6
A
186 200Right-handed alpha
Helix 7
7
A
219 229Right-handed alpha
Helix 8
8
A
277 291Right-handed alpha
Helix 9
9
A
291 310Right-handed alpha
Helix 10
10
A
348 357Right-handed alpha
Helix 11
11
A
359 362Right-handed 310
Helix 12
12
A
366 378Right-handed alpha
Helix 13
13
A
427 440Right-handed alpha
Helix 14
14
A
441 446Right-handed 310
Helix 15
15
B
25 40Right-handed alpha
Helix 16
16
B
87 100Right-handed alpha
Helix 17
17
B
112 120Right-handed 310
Helix 18
18
B
121 125Right-handed 310
Helix 19
19
B
154 168Right-handed alpha
Helix 20
20
B
186 200Right-handed alpha
Helix 21
21
B
219 229Right-handed alpha
Helix 22
22
B
277 291Right-handed alpha
Helix 23
23
B
291 311Right-handed alpha
Helix 24
24
B
348 357Right-handed alpha
Helix 25
25
B
359 362Right-handed 310
Helix 26
26
B
366 378Right-handed alpha
Helix 27
27
B
427 440Right-handed alpha
Helix 28
28
B
441 446Right-handed 310
Helix 29
29
C
25 42Right-handed alpha
Helix 30
30
C
87 103Right-handed alpha
Helix 31
31
C
112 120Right-handed 310
Helix 32
32
C
121 125Right-handed 310
Helix 33
33
C
154 168Right-handed alpha
Helix 34
34
C
186 200Right-handed alpha
Helix 35
35
C
220 229Right-handed alpha
Helix 36
36
C
277 291Right-handed alpha
Helix 37
37
C
291 311Right-handed alpha
Helix 38
38
C
348 357Right-handed alpha
Helix 39
39
C
359 362Right-handed 310
Helix 40
40
C
366 378Right-handed alpha
Helix 41
41
C
427 440Right-handed alpha
Helix 42
42
C
441 446Right-handed 310
Helix 43
43
D
25 42Right-handed alpha
Helix 44
44
D
87 101Right-handed alpha
Helix 45
45
D
112 120Right-handed 310
Helix 46
46
D
121 125Right-handed 310
Helix 47
47
D
154 168Right-handed alpha
Helix 48
48
D
186 200Right-handed alpha
Helix 49
49
D
219 229Right-handed alpha
Helix 50
50
D
282 291Right-handed alpha
Helix 51
51
D
291 311Right-handed alpha
Helix 52
52
D
348 357Right-handed alpha
Helix 53
53
D
359 362Right-handed 310
Helix 54
54
D
366 378Right-handed alpha
Helix 55
55
D
427 440Right-handed alpha
Helix 56
56
D
441 446Right-handed 310
Back to top of page
There are no sheets in PDB entry 3VEH

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il