Analysis of interatomic Contacts of Structural Units in PDB entry:
3VEP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VEP entry

There are 8 chains in PDB entry 3VEP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 PRO 12PRO 57
D
 MSE 141ALA 208
C
 PRO 12PRO 58
A
 MSE 141ASP 210
G
 ARG 11PRO 57
E
 MSE 141ASP 210
J
 PRO 12PRO 58
H
 MSE 141TYR 211
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3VEP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
X
12 29Right-handed alpha
Helix 2
2
X
37 56Right-handed alpha
Helix 3
3
D
146 158Right-handed alpha
Helix 4
4
D
159 171Right-handed alpha
Helix 5
5
D
175 184Right-handed alpha
Helix 6
6
D
186 207Right-handed alpha
Helix 7
7
C
14 29Right-handed alpha
Helix 8
8
C
37 56Right-handed alpha
Helix 9
9
A
146 158Right-handed alpha
Helix 10
10
A
159 171Right-handed alpha
Helix 11
11
A
175 184Right-handed alpha
Helix 12
12
A
186 209Right-handed alpha
Helix 13
13
G
13 29Right-handed alpha
Helix 14
14
G
37 56Right-handed alpha
Helix 15
15
E
146 158Right-handed alpha
Helix 16
16
E
159 171Right-handed alpha
Helix 17
17
E
175 184Right-handed alpha
Helix 18
18
E
186 207Right-handed alpha
Helix 19
19
J
14 29Right-handed alpha
Helix 20
20
J
37 56Right-handed alpha
Helix 21
21
H
146 158Right-handed alpha
Helix 22
22
H
159 171Right-handed alpha
Helix 23
23
H
175 184Right-handed alpha
Helix 24
24
H
186 209Right-handed alpha
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There are no sheets in PDB entry 3VEP
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