Analysis of interatomic Contacts of Structural Units in PDB entry:
3VIB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VIB entry

There are 4 chains in PDB entry 3VIB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 8ARG 209
B
 LYS 10LYS 210
C
 LYS 5ARG 208
D
 THR 6ARG 209
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 3VIB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 27Right-handed alpha
Helix 2
2
A
32 41Right-handed alpha
Helix 3
3
A
43 51Right-handed alpha
Helix 4
4
A
53 71Right-handed alpha
Helix 5
5
A
84 102Right-handed alpha
Helix 6
6
A
102 115Right-handed alpha
Helix 7
7
A
119 121Right-handed 310
Helix 8
8
A
122 150Right-handed alpha
Helix 9
9
A
158 180Right-handed alpha
Helix 10
10
A
185 204Right-handed alpha
Helix 11
11
A
205 208Right-handed 310
Helix 12
12
B
11 27Right-handed alpha
Helix 13
13
B
32 41Right-handed alpha
Helix 14
14
B
43 51Right-handed alpha
Helix 15
15
B
53 74Right-handed alpha
Helix 16
16
B
83 102Right-handed alpha
Helix 17
17
B
102 115Right-handed alpha
Helix 18
18
B
119 121Right-handed 310
Helix 19
19
B
122 150Right-handed alpha
Helix 20
20
B
158 180Right-handed alpha
Helix 21
21
B
185 204Right-handed alpha
Helix 22
22
B
205 208Right-handed 310
Helix 23
23
C
6 27Right-handed alpha
Helix 24
24
C
32 40Right-handed alpha
Helix 25
25
C
43 51Right-handed alpha
Helix 26
26
C
53 71Right-handed alpha
Helix 27
27
C
83 102Right-handed alpha
Helix 28
28
C
102 115Right-handed alpha
Helix 29
29
C
119 121Right-handed 310
Helix 30
30
C
122 150Right-handed alpha
Helix 31
31
C
158 180Right-handed alpha
Helix 32
32
C
185 204Right-handed alpha
Helix 33
33
C
205 208Right-handed 310
Helix 34
34
D
10 27Right-handed alpha
Helix 35
35
D
32 41Right-handed alpha
Helix 36
36
D
43 51Right-handed alpha
Helix 37
37
D
53 72Right-handed alpha
Helix 38
38
D
85 102Right-handed alpha
Helix 39
39
D
102 115Right-handed alpha
Helix 40
40
D
119 121Right-handed 310
Helix 41
41
D
122 148Right-handed alpha
Helix 42
42
D
158 180Right-handed alpha
Helix 43
43
D
185 204Right-handed alpha
Helix 44
44
D
205 208Right-handed 310
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There are no sheets in PDB entry 3VIB
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