Analysis of interatomic Contacts of Structural Units in PDB entry:
3VJ9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VJ9 entry

There is 1 chain in PDB entry 3VJ9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 35GLN 369
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3VJ9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
37 52Right-handed alpha
Helix 2
2
A
54 60Right-handed alpha
Helix 3
3
A
64 85Right-handed alpha
Helix 4
4
A
89 104Right-handed alpha
Helix 5
5
A
119 124Right-handed alpha
Helix 6
6
A
124 134Right-handed alpha
Helix 7
7
A
136 158Right-handed alpha
Helix 8
8
A
164 176Right-handed alpha
Helix 9
9
A
176 190Right-handed alpha
Helix 10
10
A
194 200Right-handed alpha
Helix 11
11
A
200 219Right-handed alpha
Helix 12
12
A
219 226Right-handed alpha
Helix 13
13
A
232 237Right-handed alpha
Helix 14
14
A
242 250Right-handed 310
Helix 15
15
A
251 268Right-handed alpha
Helix 16
16
A
269 279Right-handed alpha
Helix 17
17
A
282 304Right-handed alpha
Helix 18
18
A
307 312Right-handed alpha
Helix 19
19
A
317 328Right-handed alpha
Helix 20
20
A
330 347Right-handed alpha
Helix 21
21
A
355 369Right-handed alpha
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There are no sheets in PDB entry 3VJ9
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il