Analysis of interatomic Contacts of Structural Units in PDB entry:
3VJA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VJA entry

There are 2 chains in PDB entry 3VJA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 35GLN 369
B
 LEU 36GLN 369
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 3VJA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
37 52Right-handed alpha
Helix 2
2
A
54 60Right-handed alpha
Helix 3
3
A
64 85Right-handed alpha
Helix 4
4
A
89 99Right-handed alpha
Helix 5
5
A
99 104Right-handed alpha
Helix 6
6
A
119 124Right-handed alpha
Helix 7
7
A
124 134Right-handed alpha
Helix 8
8
A
136 157Right-handed alpha
Helix 9
9
A
164 176Right-handed alpha
Helix 10
10
A
176 190Right-handed alpha
Helix 11
11
A
194 200Right-handed alpha
Helix 12
12
A
200 219Right-handed alpha
Helix 13
13
A
219 226Right-handed alpha
Helix 14
14
A
232 237Right-handed alpha
Helix 15
15
A
242 250Right-handed 310
Helix 16
16
A
251 268Right-handed alpha
Helix 17
17
A
269 279Right-handed alpha
Helix 18
18
A
282 304Right-handed alpha
Helix 19
19
A
306 311Right-handed 310
Helix 20
20
A
317 328Right-handed alpha
Helix 21
21
A
330 347Right-handed alpha
Helix 22
22
A
355 368Right-handed alpha
Helix 23
23
B
37 52Right-handed alpha
Helix 24
24
B
54 60Right-handed alpha
Helix 25
25
B
64 85Right-handed alpha
Helix 26
26
B
89 104Right-handed alpha
Helix 27
27
B
119 124Right-handed alpha
Helix 28
28
B
124 134Right-handed alpha
Helix 29
29
B
136 157Right-handed alpha
Helix 30
30
B
164 176Right-handed alpha
Helix 31
31
B
176 190Right-handed alpha
Helix 32
32
B
194 200Right-handed alpha
Helix 33
33
B
200 219Right-handed alpha
Helix 34
34
B
219 226Right-handed alpha
Helix 35
35
B
232 237Right-handed alpha
Helix 36
36
B
242 250Right-handed 310
Helix 37
37
B
251 268Right-handed alpha
Helix 38
38
B
269 279Right-handed alpha
Helix 39
39
B
282 304Right-handed alpha
Helix 40
40
B
307 312Right-handed alpha
Helix 41
41
B
317 328Right-handed alpha
Helix 42
42
B
330 347Right-handed alpha
Helix 43
43
B
355 369Right-handed alpha
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There are no sheets in PDB entry 3VJA
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