Analysis of interatomic Contacts of Structural Units in PDB entry:
3VLF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VLF entry

There are 4 chains in PDB entry 3VLF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 9GLY 465
B
 MSE 380SER 452
C
 ASN 7GLY 465
D
 MSE 380SER 452
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 3VLF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 23Right-handed alpha
Helix 2
2
A
28 43Right-handed alpha
Helix 3
3
A
51 64Right-handed alpha
Helix 4
4
A
72 82Right-handed alpha
Helix 5
5
A
88 96Right-handed alpha
Helix 6
6
A
97 107Right-handed alpha
Helix 7
7
A
109 122Right-handed alpha
Helix 8
8
A
128 132Right-handed 310
Helix 9
9
A
133 143Right-handed alpha
Helix 10
10
A
149 164Right-handed alpha
Helix 11
11
A
166 175Right-handed alpha
Helix 12
12
A
177 188Right-handed alpha
Helix 13
13
A
189 204Right-handed alpha
Helix 14
14
A
220 228Right-handed alpha
Helix 15
15
A
230 251Right-handed alpha
Helix 16
16
A
255 259Right-handed 310
Helix 17
17
A
263 273Right-handed alpha
Helix 18
18
A
277 282Right-handed alpha
Helix 19
19
A
284 296Right-handed alpha
Helix 20
20
A
303 313Right-handed alpha
Helix 21
21
A
319 330Right-handed alpha
Helix 22
22
A
331 339Right-handed alpha
Helix 23
23
A
339 345Right-handed alpha
Helix 24
24
A
353 361Right-handed alpha
Helix 25
25
A
363 371Right-handed alpha
Helix 26
26
A
375 382Right-handed alpha
Helix 27
27
A
383 395Right-handed alpha
Helix 28
28
A
397 406Right-handed alpha
Helix 29
29
A
408 414Right-handed alpha
Helix 30
30
A
420 424Right-handed 310
Helix 31
31
A
426 442Right-handed alpha
Helix 32
32
A
443 448Right-handed alpha
Helix 33
33
A
451 465Right-handed alpha
Helix 34
34
B
383 394Right-handed alpha
Helix 35
35
B
403 410Right-handed alpha
Helix 36
36
B
415 434Right-handed alpha
Helix 37
37
B
439 451Right-handed alpha
Helix 38
38
C
11 18Right-handed alpha
Helix 39
39
C
28 43Right-handed alpha
Helix 40
40
C
51 64Right-handed alpha
Helix 41
41
C
72 82Right-handed alpha
Helix 42
42
C
92 97Right-handed alpha
Helix 43
43
C
97 107Right-handed alpha
Helix 44
44
C
109 122Right-handed alpha
Helix 45
45
C
128 132Right-handed 310
Helix 46
46
C
133 143Right-handed alpha
Helix 47
47
C
149 162Right-handed alpha
Helix 48
48
C
166 174Right-handed alpha
Helix 49
49
C
177 187Right-handed alpha
Helix 50
50
C
189 207Right-handed alpha
Helix 51
51
C
220 228Right-handed alpha
Helix 52
52
C
230 250Right-handed alpha
Helix 53
53
C
251 252Right-handed 310
Helix 54
54
C
253 256Right-handed 310
Helix 55
55
C
257 262Right-handed alpha
Helix 56
56
C
264 271Right-handed alpha
Helix 57
57
C
277 284Right-handed alpha
Helix 58
58
C
284 296Right-handed alpha
Helix 59
59
C
300 302Right-handed 310
Helix 60
60
C
303 312Right-handed alpha
Helix 61
61
C
322 330Right-handed alpha
Helix 62
62
C
331 337Right-handed alpha
Helix 63
63
C
339 344Right-handed alpha
Helix 64
64
C
350 352Right-handed 310
Helix 65
65
C
353 361Right-handed alpha
Helix 66
66
C
363 369Right-handed alpha
Helix 67
67
C
377 382Right-handed alpha
Helix 68
68
C
383 394Right-handed alpha
Helix 69
69
C
397 406Right-handed alpha
Helix 70
70
C
408 416Right-handed alpha
Helix 71
71
C
427 442Right-handed alpha
Helix 72
72
C
451 464Right-handed alpha
Helix 73
73
D
384 395Right-handed alpha
Helix 74
74
D
403 411Right-handed alpha
Helix 75
75
D
415 434Right-handed alpha
Helix 76
76
D
439 451Right-handed alpha
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There are no sheets in PDB entry 3VLF
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