Analysis of interatomic Contacts of Structural Units in PDB entry:
3VMS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VMS entry

There are 2 chains in PDB entry 3VMS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 43ARG 269
B
 LYS 45ARG 269
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 3VMS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 66Right-handed alpha
Helix 2
2
A
71 79Right-handed 310
Helix 3
3
A
84 88Right-handed 310
Helix 4
4
A
89 101Right-handed alpha
Helix 5
5
A
111 119Right-handed alpha
Helix 6
6
A
133 143Right-handed alpha
Helix 7
7
A
149 154Right-handed alpha
Helix 8
8
A
154 167Right-handed alpha
Helix 9
9
A
168 179Right-handed alpha
Helix 10
10
A
188 197Right-handed alpha
Helix 11
11
A
212 221Right-handed alpha
Helix 12
12
A
240 252Right-handed alpha
Helix 13
13
A
256 268Right-handed alpha
Helix 14
14
B
46 65Right-handed alpha
Helix 15
15
B
71 76Right-handed alpha
Helix 16
16
B
84 88Right-handed 310
Helix 17
17
B
89 100Right-handed alpha
Helix 18
18
B
111 120Right-handed alpha
Helix 19
19
B
133 143Right-handed alpha
Helix 20
20
B
149 167Right-handed alpha
Helix 21
21
B
168 177Right-handed alpha
Helix 22
22
B
188 197Right-handed alpha
Helix 23
23
B
212 222Right-handed alpha
Helix 24
24
B
235 252Right-handed alpha
Helix 25
25
B
256 268Right-handed alpha
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There are no sheets in PDB entry 3VMS
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