Analysis of interatomic Contacts of Structural Units in PDB entry:
3VTX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VTX entry

There are 2 chains in PDB entry 3VTX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 43ARG 223
B
 MET 40PRO 222
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3VTX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
43 58Right-handed alpha
Helix 2
2
A
59 74Right-handed alpha
Helix 3
3
A
77 91Right-handed alpha
Helix 4
4
A
93 108Right-handed alpha
Helix 5
5
A
111 125Right-handed alpha
Helix 6
6
A
127 142Right-handed alpha
Helix 7
7
A
145 159Right-handed alpha
Helix 8
8
A
161 176Right-handed alpha
Helix 9
9
A
179 193Right-handed alpha
Helix 10
10
A
195 209Right-handed alpha
Helix 11
11
A
210 217Right-handed alpha
Helix 12
12
B
42 58Right-handed alpha
Helix 13
13
B
59 74Right-handed alpha
Helix 14
14
B
77 91Right-handed alpha
Helix 15
15
B
93 108Right-handed alpha
Helix 16
16
B
111 125Right-handed alpha
Helix 17
17
B
127 142Right-handed alpha
Helix 18
18
B
145 159Right-handed alpha
Helix 19
19
B
161 176Right-handed alpha
Helix 20
20
B
179 193Right-handed alpha
Helix 21
21
B
195 217Right-handed alpha
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There are no sheets in PDB entry 3VTX
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il