Analysis of interatomic Contacts of Structural Units in PDB entry:
3VUQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3VUQ entry

There are 4 chains in PDB entry 3VUQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 8PRO 187
B
 ALA 8PRO 187
C
 GLY 9PRO 187
D
 VAL 10PRO 187
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 3VUQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 33Right-handed alpha
Helix 2
2
A
34 43Right-handed alpha
Helix 3
3
A
45 53Right-handed alpha
Helix 4
4
A
55 81Right-handed alpha
Helix 5
5
A
84 106Right-handed alpha
Helix 6
6
A
106 115Right-handed alpha
Helix 7
7
A
118 143Right-handed alpha
Helix 8
8
A
151 161Right-handed alpha
Helix 9
9
A
171 184Right-handed alpha
Helix 10
10
B
9 29Right-handed alpha
Helix 11
11
B
30 33Right-handed 310
Helix 12
12
B
34 43Right-handed alpha
Helix 13
13
B
45 53Right-handed alpha
Helix 14
14
B
55 80Right-handed alpha
Helix 15
15
B
84 106Right-handed alpha
Helix 16
16
B
106 115Right-handed alpha
Helix 17
17
B
118 143Right-handed alpha
Helix 18
18
B
151 163Right-handed alpha
Helix 19
19
B
172 184Right-handed alpha
Helix 20
20
C
10 29Right-handed alpha
Helix 21
21
C
34 43Right-handed alpha
Helix 22
22
C
45 53Right-handed alpha
Helix 23
23
C
55 81Right-handed alpha
Helix 24
24
C
84 106Right-handed alpha
Helix 25
25
C
106 115Right-handed alpha
Helix 26
26
C
118 143Right-handed alpha
Helix 27
27
C
151 162Right-handed alpha
Helix 28
28
C
166 173Right-handed alpha
Helix 29
29
C
173 184Right-handed alpha
Helix 30
30
D
11 29Right-handed alpha
Helix 31
31
D
34 42Right-handed alpha
Helix 32
32
D
47 52Right-handed 310
Helix 33
33
D
55 81Right-handed alpha
Helix 34
34
D
84 103Right-handed alpha
Helix 35
35
D
106 115Right-handed alpha
Helix 36
36
D
118 144Right-handed alpha
Helix 37
37
D
151 163Right-handed alpha
Helix 38
38
D
172 184Right-handed alpha
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There are no sheets in PDB entry 3VUQ
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